RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 INMT-MINDY4F8WBC2 141 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SYT7O43581 403 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TIMM8AO60220 97 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 HSBP1O75506 76 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 MMP23AO75900 390 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR2F2O95006 317 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 YIF1AO95070 293 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SIX6O95475 246 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 PTHP01270 115 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 CD74P04233 296 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SERPINE2P07093 398 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR5G3P0C626 314 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR13C7P0DN81 318 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 CD79AP11912 226 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 BCKDHAP12694 445 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 FABP4P15090 132 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 CFHR2P36980 270 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 MDH2P40926 338 aaKnown RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR3A4PP47883 348 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 NPBWR1P48145 328 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 POLR2HP52434 150 aaKnown RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 LSM3P62310 102 aaKnown RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 CCL8P80075 99 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 ST3GAL4Q11206 333 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 ZNF141Q15928 474 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 GSG1Q2KHT4 349 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 ANKRD55Q3KP44 614 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 LGALSLQ3ZCW2 172 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TMEM128Q5BJH2 165 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 KLF17Q5JT82 389 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TPTE2P1Q5T6R2 138 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 LIPKQ5VXJ0 399 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TMEM42Q69YG0 159 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 XAF1Q6GPH4 301 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 NOXRED1Q6NXP6 359 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 NIPAL3Q6P499 406 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 UNQ9370/PRO34162Q6UXP9 181 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 FBXW12Q6X9E4 464 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 C19orf35Q6ZS72 473 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 FA2HQ7L5A8 372 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 MDP1Q86V88 176 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 NIT1Q86X76 327 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 RIMKLAQ8IXN7 391 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SYS1Q8N2H4 156 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 ZNF664Q8N3J9 261 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SPICQ8N5J4 248 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 ZIC4Q8N9L1 334 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SLC30A7Q8NEW0 376 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR4S1Q8NGB4 309 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR5A2Q8NGI9 324 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR9I1Q8NGQ6 314 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR1L4Q8NGR5 311 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR13C6PQ8NH95 151 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 LINC01006Q8NI28 216 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SYNPRQ8TBG9 265 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 FBXO25Q8TCJ0 367 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SLC7A13Q8TCU3 470 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 RNASEH2CQ8TDP1 164 aaKnown RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 CANT1Q8WVQ1 401 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 EMG1Q92979 244 aaKnown RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 LHX4Q969G2 390 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 PPCDCQ96CD2 204 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 YIPF6Q96EC8 236 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 RAB40CQ96S21 281 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SDF2Q99470 211 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SPAG8Q99932 426 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 MRPL57Q9BQC6 102 aaKnown RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 MAP1LC3CQ9BXW4 147 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SIRPDQ9H106 197 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TXNIPQ9H3M7 391 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TUBA4BQ9H853 241 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 MMP26Q9NRE1 261 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TMEM38BQ9NVV0 291 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 OR5V1Q9UGF6 321 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 JPT1Q9UK76 154 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 VPREB3Q9UKI3 123 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TRAPPC2LQ9UL33 140 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 EMCNQ9ULC0 261 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 PSG8Q9UQ74 426 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TMED7Q9Y3B3 224 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TPRKBQ9Y3C4 175 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 CSDC2Q9Y534 153 aaKnown RBP3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 IGLV3-9A0A075B6K5 115 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 A0A087WUJ7 227 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 KIR2DL5BA0A0G2JN68 375 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 KIR2DL5BA0A0G2JPC4 375 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 A0A1W2PPE3 182 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 ANKRD20A5PA0PJZ0 165 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 PRSS37A4D1T9 235 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 C3orf84H3BNL1 204 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 J3QR89 54 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 CTDSPLO15194 276 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 RBFOX2O43251 390 aaKnown RBP eCLIP3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 ENSAO43768 121 aaKnown RBP3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 ENTPD6O75354 484 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 UBL3O95164 117 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 TMEM50AO95807 157 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 CLIC3O95833 236 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 HPRT1P00492 218 aa3.32□□□□□ -1.88
HMGB3P5-201ENST00000428894 CFDP00746 253 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms