RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 SERPINE2P07093 398 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 CTSGP08311 255 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 SDC2P34741 201 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 SCAND1P57086 179 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 CDNFQ49AH0 187 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 ZNF767PQ75MW2 155 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 NR2C2APQ86WQ0 139 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 SPAG16Q8N0X2 631 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 LILRB2Q8N423 598 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 UBAC2Q8NBM4 344 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 C21orf62Q9NYP8 219 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 THYN1Q9P016 225 aa9.8□□□□□ -0.84
VEGFB-202ENST00000426086 DYNC1H1Q14204 4646 aaKnown RBP9.8□□□□□ -0.84
VEGFB-202ENST00000426086 TRAV10A0A0B4J240 114 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 C15orf61A6NNL5 157 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 SULT1C2O00338 296 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 SSX5O60225 188 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 CTXN2P0C2S0 81 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 RAB6AP20340 208 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 DEFB131AP59861 70 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 POU2AF1Q16633 256 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 GPR107Q5VW38 600 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 CNIH2Q6PI25 160 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 SPSB3Q6PJ21 355 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 POM121L12Q8N7R1 296 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 TMEM116Q8NCL8 245 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 RAB2BQ8WUD1 216 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
VEGFB-202ENST00000426086 COMMD5Q9GZQ3 224 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 ATG5Q9H1Y0 275 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 RNF167Q9H6Y7 350 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 CELA1Q9UNI1 258 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 X6R8D5 127 aa9.79□□□□□ -0.84
VEGFB-202ENST00000426086 TEX50A0A1B0GTY4 177 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 TMEM235A6NFC5 223 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 RPS19P39019 145 aaKnown RBP9.78□□□□□ -0.84
VEGFB-202ENST00000426086 Q56UQ5 140 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 PVRIGQ6DKI7 326 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 SECTM1Q8WVN6 248 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 GIMAP1Q8WWP7 306 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 SRSF8Q9BRL6 282 aaKnown RBP9.78□□□□□ -0.84
VEGFB-202ENST00000426086 RNF126Q9BV68 326 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 TMEM140Q9NV12 185 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 PLA2G2EQ9NZK7 142 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 NDUFA13Q9P0J0 144 aa9.78□□□□□ -0.84
VEGFB-202ENST00000426086 F11RQ9Y624 299 aaKnown RBP9.78□□□□□ -0.84
VEGFB-202ENST00000426086 SMIM30A4D0T7 59 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 ZNF701M0R085 212 aaPredicted RBP9.77□□□□□ -0.85
VEGFB-202ENST00000426086 NUPL2O15504 423 aaKnown RBP9.77□□□□□ -0.85
VEGFB-202ENST00000426086 APOHP02749 345 aaPredicted RBP9.77□□□□□ -0.85
VEGFB-202ENST00000426086 TRAPPC2P0DI81 140 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 TRAPPC2BP0DI82 140 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 C4BPBP20851 252 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 CMC4P56277 68 aaPredicted RBP9.77□□□□□ -0.85
VEGFB-202ENST00000426086 VBP1P61758 197 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 LSM3P62310 102 aaKnown RBP9.77□□□□□ -0.85
VEGFB-202ENST00000426086 HACD4Q5VWC8 232 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 SFXN4Q6P4A7 337 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 TCF24Q7RTU0 167 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 CLVS1Q8IUQ0 354 aaPredicted RBP9.77□□□□□ -0.85
VEGFB-202ENST00000426086 SLC25A46Q96AG3 418 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 OR10C1Q96KK4 312 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 NAA50Q9GZZ1 169 aaKnown RBP9.77□□□□□ -0.85
VEGFB-202ENST00000426086 ANXA10Q9UJ72 324 aa9.77□□□□□ -0.85
VEGFB-202ENST00000426086 AGRNO00468 2067 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 METTL21EPA6NDL7 271 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 RBFOX2O43251 390 aaKnown RBP eCLIP9.76□□□□□ -0.854e-7■□□□□ 10.5
VEGFB-202ENST00000426086 HPRT1P00492 218 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 IGHV3-48P01763 117 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 CLEC2LP0C7M8 214 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 NQO2P16083 231 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 TAS2R31P59538 309 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 NCS1P62166 190 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 C12orf74Q32Q52 190 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 ST8SIA2Q92186 375 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 DCSTAMPQ9H295 470 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 NDUFA4L2Q9NRX3 87 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 NSG2Q9Y328 171 aa9.76□□□□□ -0.85
VEGFB-202ENST00000426086 IGLV2-18A0A075B6J9 118 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 IGHV3-66A0A0C4DH42 116 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 SMIM31A0A1B0GVY4 71 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 ZNF705EA8MWA4 302 aaPredicted RBP9.75□□□□□ -0.85
VEGFB-202ENST00000426086 YIF1AO95070 293 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 AMBPP02760 352 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 FCGR2CP31995 323 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 TGFBR1P36897 503 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 RORCP51449 518 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 MXD1Q05195 221 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 LGALS9BQ3B8N2 356 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 Q6ZR54 194 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 DMBX1Q8NFW5 382 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 OR51H1Q8NH63 302 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 DGCR14Q96DF8 476 aaKnown RBP9.75□□□□□ -0.85
VEGFB-202ENST00000426086 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 ATP6V0BQ99437 205 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 HINT2Q9BX68 163 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 CLEC5AQ9NY25 188 aa9.75□□□□□ -0.85
VEGFB-202ENST00000426086 DNAH11Q96DT5 4516 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms