RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 RBMY1BA6NDE4 496 aaKnown RBP7.09□□□□□ -1.27
NUP50-205ENST00000419387 RBMY1EA6NEQ0 496 aaKnown RBP7.09□□□□□ -1.27
NUP50-205ENST00000419387 MARCH11A6NNE9 402 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 A8MWP6 167 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 M0QYG6 137 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 CYB5BO43169 146 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 RLN1P04808 185 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 RBMY1DP0C7P1 496 aaKnown RBP7.09□□□□□ -1.27
NUP50-205ENST00000419387 TRAPPC2P0DI81 140 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 TRAPPC2BP0DI82 140 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 RPA2P15927 270 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 F2RP25116 425 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 RCVRNP35243 200 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 LPAR6P43657 344 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 TAS2R46P59540 309 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 ERVK-16P61578 105 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 TM4SF20Q53R12 229 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 SLC16A13Q7RTY0 426 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 HSD17B13Q7Z5P4 300 aaPredicted RBP7.09□□□□□ -1.27
NUP50-205ENST00000419387 CMTM1Q8IZ96 169 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 CADM3Q8N126 398 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 TMEM229BQ8NBD8 167 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 OR10W1Q8NGF6 305 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 OR1L8Q8NGR8 309 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 OR5H2Q8NGV7 314 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 OR6F1Q8NGZ6 308 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 ZNF502Q8TBZ5 544 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 TRIM63Q969Q1 353 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 WFDC10AQ9H1F0 79 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 NDUFA4L2Q9NRX3 87 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 MLXQ9UH92 298 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 SELENOKQ9Y6D0 94 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 STARD9Q9P2P6 4700 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 GPR31O00270 319 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 KRASP01116 189 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 SERPINE2P07093 398 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 C8orf88P0DMB2 117 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 OR13C7P0DN81 318 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 GPR183P32249 361 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
NUP50-205ENST00000419387 MRPS10P82664 201 aaKnown RBP7.08□□□□□ -1.28
NUP50-205ENST00000419387 SSBP1Q04837 148 aaKnown RBP7.08□□□□□ -1.28
NUP50-205ENST00000419387 WT1-ASQ06250 92 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 IL18Q14116 193 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 BAK1Q16611 211 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 ZNF585BQ52M93 769 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 SLC25A24Q6NUK1 477 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 PLET1Q6UQ28 207 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 UNQ9165/PRO28630Q6UXU0 137 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 TMEM61Q8N0U2 210 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 GDPD1Q8N9F7 314 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 VN1R17PQ8TDU5 208 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 C15orf40Q8WUR7 153 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 MARC2Q969Z3 335 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 ZNF436Q9C0F3 470 aaPredicted RBP7.08□□□□□ -1.28
NUP50-205ENST00000419387 SRRQ9GZT4 340 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 RETNQ9HD89 108 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 GAR1Q9NY12 217 aaKnown RBP7.08□□□□□ -1.28
NUP50-205ENST00000419387 MRPL27Q9P0M9 148 aaKnown RBP7.08□□□□□ -1.28
NUP50-205ENST00000419387 RABL2AQ9UBK7 228 aaPredicted RBP7.08□□□□□ -1.28
NUP50-205ENST00000419387 RABL2BQ9UNT1 228 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 NSG2Q9Y328 171 aa7.08□□□□□ -1.28
NUP50-205ENST00000419387 TRAV25A0A0B4J276 109 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 IGHV3-35A0A0C4DH35 117 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 LCE6AA0A183 80 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 TGOLN2O43493 480 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 SNAPC5O75971 98 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 SCAF4O95104 1147 aaKnown RBP7.07□□□□□ -1.28
NUP50-205ENST00000419387 G6PCP35575 357 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 TSPAN5P62079 268 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 ANKRD55Q3KP44 614 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 FAAP20Q6NZ36 180 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 STEAP1BQ6NZ63 245 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 LPCAT3Q6P1A2 487 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 BTNL8Q6UX41 500 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 RBPMS2Q6ZRY4 209 aaKnown RBP7.07□□□□□ -1.28
NUP50-205ENST00000419387 OR52B4Q8NGK2 314 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 LSM10Q969L4 123 aaKnown RBP7.07□□□□□ -1.28
NUP50-205ENST00000419387 FAM110AQ9BQ89 295 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 HINT2Q9BX68 163 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 FXYD6Q9H0Q3 95 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 BATF3Q9NR55 127 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 FKBP11Q9NYL4 201 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 PRNDQ9UKY0 176 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 UFC1Q9Y3C8 167 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 OR51B2Q9Y5P1 312 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 F11RQ9Y624 299 aaKnown RBP7.07□□□□□ -1.28
NUP50-205ENST00000419387 LYSTQ99698 3801 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 TENM2Q9NT68 2774 aa7.07□□□□□ -1.28
NUP50-205ENST00000419387 CSMD3Q7Z407 3707 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 OR2T8A6NH00 312 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 S100GP29377 79 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 S100A5P33763 92 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 MFAP2P55001 183 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 UCP3P55916 312 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 KLF9Q13886 244 aaPredicted RBP7.06□□□□□ -1.28
NUP50-205ENST00000419387 PHLDA2Q53GA4 152 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 SPSB3Q6PJ21 355 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 LINC00299Q6ZSB3 139 aa7.06□□□□□ -1.28
NUP50-205ENST00000419387 OR4C16Q8NGL9 310 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms