RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PVRIGQ6DKI7 326 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 TMEM116Q8NCL8 245 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 HAX1O00165 279 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 TCF15Q12870 199 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 HERPUD1Q15011 391 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 RRN3P1Q2M238 152 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 COLCA1Q6ZS62 124 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 NCOR1P1Q9H4R4 102 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 PROB1E7EW31 1015 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 WNT2P09544 360 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 DUTP33316 252 aaKnown RBP13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 HERVK_113P61574 105 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 ZNF324BQ6AW86 544 aaPredicted RBP13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 Q6ZN92 141 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 ZNF257Q9Y2Q1 563 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 COL6A6A6NMZ7 2263 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 IGHV3OR16-10A0A075B7F0 116 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 DPRXA6NFQ7 191 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 DUX5Q96PT3 197 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 VPS25Q9BRG1 176 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 TMEM191AQ9H0A3 160 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 TBL2Q9Y4P3 447 aaKnown RBP13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 PCNX2A6NKB5 2137 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 TCAPO15273 167 aa13.97□□□□□ -0.17
PCDHA13-202ENST00000409494 IGKV1-12A0A0C4DH73 117 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 IGKV1D-12P01611 117 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 SRSF12Q8WXF0 261 aaKnown RBP13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 ZNF318Q5VUA4 2279 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 ITGB1BP1O14713 200 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 GCGP01275 180 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 OR5AL1P0C617 328 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 TRGC1P0CF51 173 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 SAA1P0DJI8 122 aaPredicted RBP13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 IBA57Q5T440 356 aaKnown RBP13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 ASCL4Q6XD76 172 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 NPIPB6E9PJ23 425 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 NAPSAO96009 420 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 FCER1GP30273 86 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 ADIPOQQ15848 244 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 PRO3102Q9H379 93 aa13.96□□□□□ -0.17
PCDHA13-202ENST00000409494 REG1AP05451 166 aa13.96□□□□□ -0.18
PCDHA13-202ENST00000409494 IL6RP08887 468 aaPredicted RBP13.96□□□□□ -0.18
PCDHA13-202ENST00000409494 GCHFRP30047 84 aa13.96□□□□□ -0.18
PCDHA13-202ENST00000409494 RCC1LQ96I51 464 aaKnown RBP13.96□□□□□ -0.18
PCDHA13-202ENST00000409494 TBX15Q96SF7 602 aa13.96□□□□□ -0.18
PCDHA13-202ENST00000409494 LTBP2Q14767 1821 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 CMC4P56277 68 aaPredicted RBP13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 PARLQ9H300 379 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 A0A0A6YYD4 124 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 ZNF343Q6P1L6 599 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 OR4C5Q8NGB2 326 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 VOPP1Q96AW1 172 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 NPCDR1Q9BY65 106 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 PROK2Q9HC23 129 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 SRP19P09132 144 aaKnown RBP13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 OR9G9P0C7N8 305 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 IGHV1-8P0DP01 117 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 TFPI2P48307 235 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 PRCDQ00LT1 54 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 VN1R17PQ8TDU5 208 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 MOB4Q9Y3A3 225 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 PAM16Q9Y3D7 125 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 DMRT1Q9Y5R6 373 aa13.95□□□□□ -0.18
PCDHA13-202ENST00000409494 VENTXO95231 258 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 HLA-DQA1P01909 254 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 APCSP02743 223 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 VDAC2P45880 294 aaPredicted RBP13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 CYB5R2Q6BCY4 276 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 IGFL2Q6UWQ7 119 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 HSPB8Q9UJY1 196 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 SRSF3P84103 164 aaKnown RBP13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 KLHDC3Q9BQ90 382 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 WNT10AQ9GZT5 417 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 TUBA4BQ9H853 241 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 SPTBN1Q01082 2364 aaKnown RBP13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 ARL14EPLP0DKL9 152 aa13.94□□□□□ -0.18
PCDHA13-202ENST00000409494 MFAP2P55001 183 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 ZNF600Q6ZNG1 722 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 RSPO3Q9BXY4 272 aaPredicted RBP13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 RRHO14718 337 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 NBEAP1P0C6P0 100 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 HTN1P15515 57 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 AGAP20933 346 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 LINC00305Q7Z4B0 112 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 ZCCHC24Q8N2G6 241 aaKnown RBP13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 MYO7BQ6PIF6 2116 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 FANCMQ8IYD8 2048 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 CD5P06127 495 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 PRSS1P07477 247 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 GATA4P43694 442 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 DIDO1Q9BTC0 2240 aaKnown RBP13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 MED12Q93074 2177 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 IGHV2-26A0A0B4J1V2 119 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 CFPP27918 469 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 ID3Q02535 119 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 REG4Q9BYZ8 158 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 TTC28Q96AY4 2481 aa13.93□□□□□ -0.18
PCDHA13-202ENST00000409494 MGPP08493 103 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms