RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 DFFBO76075 338 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 SLC22A5O76082 557 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 P0DMU3 169 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 FAM231AP0DMU4 169 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 FAM231CP0DMU5 169 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 CMC4P56277 68 aaPredicted RBP8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TNP2Q05952 138 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 Q56UQ5 140 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 CNIH2Q6PI25 160 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 UFD1Q92890 307 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 DGCR14Q96DF8 476 aaKnown RBP8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 ATP6V0BQ99437 205 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 VSIRQ9H7M9 311 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TMEM235A6NFC5 223 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 IFITM5A6NNB3 132 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 I3L2K1 104 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 RBFOX2O43251 390 aaKnown RBP eCLIP8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TRAPPC2P0DI81 140 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TRAPPC2BP0DI82 140 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 RAB6AP20340 208 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 GADD45AP24522 165 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TAS2R31P59538 309 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 HACD4Q5VWC8 232 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 C8orf59Q8N0T1 100 aaPredicted RBP8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 Q8N1X5 172 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 SECTM1Q8WVN6 248 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 COMMD5Q9GZQ3 224 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 DCSTAMPQ9H295 470 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 NSG2Q9Y328 171 aa8.5□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TRAV14DV4A0A0A6YYC5 116 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 ARL6IP5O75915 188 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 YIF1AO95070 293 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 CTXN2P0C2S0 81 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 NQO2P16083 231 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TOMM20LQ6UXN7 152 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 NDUFAF3Q9BU61 184 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 NXF2Q9GZY0 626 aaKnown RBP8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 ATG5Q9H1Y0 275 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 ANXA10Q9UJ72 324 aa8.49□□□□□ -1.05
SPTLC1P3-201ENST00000403408 SMIM30A4D0T7 59 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 HPRT1P00492 218 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 HSMCR30P0CW71 290 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 FCGR2CP31995 323 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 SSX1Q16384 188 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 ZNF818PQ6ZRF7 136 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 STHQ8IWL8 128 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 OR1L8Q8NGR8 309 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 CENPOQ9BU64 300 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 HINT2Q9BX68 163 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 ZFAND3Q9H8U3 227 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TBC1D24Q9ULP9 559 aa8.48□□□□□ -1.05
SPTLC1P3-201ENST00000403408 A0A1B0GU03 582 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 K7EQG2 157 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 ST8SIA3O43173 380 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 FGF2P09038 288 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 MSMO1Q15800 293 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 LCE2CQ5TA81 110 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 MORN3Q6PF18 240 aaPredicted RBP8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 PACRGLQ8N7B6 248 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 OR13F1Q8NGS4 319 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 OR51H1Q8NH63 302 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 LSM10Q969L4 123 aaKnown RBP8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 SLC25A46Q96AG3 418 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 PLEKHA2Q9HB19 425 aa8.47□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TRAV2A0A0B4J234 112 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 TRAV1-2A0A0B4J238 106 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 DNASE2O00115 360 aaPredicted RBP8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 PPYP01298 95 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 IFNA10P01566 189 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 FCER2P06734 321 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 RELQ04864 619 aaPredicted RBP8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 C1orf134Q5TEV5 83 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 UBE2UQ5VVX9 321 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 DMBX1Q8NFW5 382 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 CMTM3Q96MX0 182 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 SCRT2Q9NQ03 307 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 OR51B2Q9Y5P1 312 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 UBR4Q5T4S7 5183 aa8.46□□□□□ -1.06
SPTLC1P3-201ENST00000403408 METTL21EPA6NDL7 271 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 MT-CO2P00403 227 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ZNF688P0C7X2 276 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 SPP1P10451 314 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 GNRHRP30968 328 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 MFAP4P55083 255 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 PAFAH1B2P68402 229 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 MLLT11Q13015 90 aaPredicted RBP8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 TRAM1Q15629 374 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ACTL10Q5JWF8 245 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 THOC7Q6I9Y2 204 aaKnown RBP8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 HSD17B13Q7Z5P4 300 aaPredicted RBP8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 OR1P1Q8NH06 330 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 DCANP1Q8TF63 244 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 MISP3Q96FF7 219 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 AIFM2Q9BRQ8 373 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 SLC5A7Q9GZV3 580 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 DUSP21Q9H596 190 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 TMEM14BQ9NUH8 114 aa8.45□□□□□ -1.06
SPTLC1P3-201ENST00000403408 RABAC1Q9UI14 185 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms