RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 FAM25GB3EWG6 89 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 GPR107Q5VW38 600 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 TBC1D26Q86UD7 250 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 OR5B3Q8NH48 314 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 TMEM190Q8WZ59 177 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 BSCL2Q96G97 398 aaPredicted RBP15.73■□□□□ 0.11
VSX1-201ENST00000376707 TSC22D3Q99576 134 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 TMEM14BQ9NUH8 114 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 FKBP11Q9NYL4 201 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 F11RQ9Y624 299 aaKnown RBP15.73■□□□□ 0.11
VSX1-201ENST00000376707 LYSTQ99698 3801 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 IGHV3-21A0A0B4J1V1 117 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 ALDH3B2P48448 385 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 SPSB3Q6PJ21 355 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 OR2C3Q8N628 320 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 SEC22AQ96IW7 307 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 ATP6V0BQ99437 205 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 MRPS26Q9BYN8 205 aaKnown RBP15.72■□□□□ 0.11
VSX1-201ENST00000376707 C5orf66Q9H5L9 145 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 DAZ1Q9NQZ3 744 aaKnown RBP15.72■□□□□ 0.11
VSX1-201ENST00000376707 C21orf62Q9NYP8 219 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 KLK11Q9UBX7 282 aa15.72■□□□□ 0.11
VSX1-201ENST00000376707 C15orf61A6NNL5 157 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 M0QYG6 137 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 TBPP20226 339 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 MFAP2P55001 183 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 LHFPL1Q86WI0 220 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 UBAC2Q8NBM4 344 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 OR52I2Q8NH67 350 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 C15orf40Q8WUR7 153 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 TMEM56Q96MV1 263 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 ABHD1Q96SE0 405 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 SPAG8Q99932 426 aaPredicted RBP15.71■□□□□ 0.11
VSX1-201ENST00000376707 EXTL2Q9UBQ6 330 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 MTFP1Q9UDX5 166 aa15.71■□□□□ 0.11
VSX1-201ENST00000376707 DBX1A6NMT0 343 aa15.7■□□□□ 0.1
VSX1-201ENST00000376707 IGKV1-39P01597 117 aa15.7■□□□□ 0.1
VSX1-201ENST00000376707 IGKV1D-39P04432 117 aa15.7■□□□□ 0.1
VSX1-201ENST00000376707 RNASE10Q5GAN6 216 aaKnown RBP15.7■□□□□ 0.1
VSX1-201ENST00000376707 LAMTOR1Q6IAA8 161 aa15.7■□□□□ 0.1
VSX1-201ENST00000376707 ARRDC1Q8N5I2 433 aa15.7■□□□□ 0.1
VSX1-201ENST00000376707 SCARB1Q8WTV0 552 aa15.7■□□□□ 0.1
VSX1-201ENST00000376707 ZNF486Q96H40 463 aaPredicted RBP15.7■□□□□ 0.1
VSX1-201ENST00000376707 C20orf24Q9BUV8 137 aa15.7■□□□□ 0.1
VSX1-201ENST00000376707 NDUFA4O00483 81 aa15.69■□□□□ 0.1
VSX1-201ENST00000376707 RND3P61587 244 aa15.69■□□□□ 0.1
VSX1-201ENST00000376707 Q56UQ5 140 aa15.69■□□□□ 0.1
VSX1-201ENST00000376707 GPR141Q7Z602 305 aa15.69■□□□□ 0.1
VSX1-201ENST00000376707 OVOL2Q9BRP0 275 aa15.69■□□□□ 0.1
VSX1-201ENST00000376707 CHRDL1Q9BU40 450 aa15.69■□□□□ 0.1
VSX1-201ENST00000376707 K7EIM0 57 aa15.68■□□□□ 0.1
VSX1-201ENST00000376707 TSPAN4O14817 238 aa15.68■□□□□ 0.1
VSX1-201ENST00000376707 CD3DP04234 171 aa15.68■□□□□ 0.1
VSX1-201ENST00000376707 RNASE12Q5GAN4 147 aaKnown RBP15.68■□□□□ 0.1
VSX1-201ENST00000376707 H2BFWTQ7Z2G1 175 aa15.68■□□□□ 0.1
VSX1-201ENST00000376707 MIXL1Q9H2W2 232 aa15.68■□□□□ 0.1
VSX1-201ENST00000376707 UBQLN2Q9UHD9 624 aa15.68■□□□□ 0.1
VSX1-201ENST00000376707 IGHV3OR16-8A0A075B7F1 116 aa15.67■□□□□ 0.1
VSX1-201ENST00000376707 F8W735 103 aaPredicted RBP15.67■□□□□ 0.1
VSX1-201ENST00000376707 APOC4P55056 127 aa15.67■□□□□ 0.1
VSX1-201ENST00000376707 OR1P1Q8NH06 330 aa15.67■□□□□ 0.1
VSX1-201ENST00000376707 MRGPRFQ96AM1 343 aa15.67■□□□□ 0.1
VSX1-201ENST00000376707 ZNF207O43670 478 aaKnown RBP15.66■□□□□ 0.1
VSX1-201ENST00000376707 CD74P04233 296 aa15.66■□□□□ 0.1
VSX1-201ENST00000376707 ADMP35318 185 aa15.66■□□□□ 0.1
VSX1-201ENST00000376707 TMEM229BQ8NBD8 167 aa15.66■□□□□ 0.1
VSX1-201ENST00000376707 ZNF114Q8NC26 417 aa15.66■□□□□ 0.1
VSX1-201ENST00000376707 OR4A16Q8NH70 328 aa15.66■□□□□ 0.1
VSX1-201ENST00000376707 DNAH1Q9P2D7 4330 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 OR4C46A6NHA9 309 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 K7EMT4 169 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 PIGPP57054 158 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 PRCDQ00LT1 54 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 SSBP1Q04837 148 aaKnown RBP15.65■□□□□ 0.1
VSX1-201ENST00000376707 SPCS2Q15005 226 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 OR4D10Q8NGI6 311 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 TERB2Q8NHR7 220 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 MISP3Q96FF7 219 aa15.65■□□□□ 0.1
VSX1-201ENST00000376707 C15orf62A8K5M9 175 aa15.64■□□□□ 0.09
VSX1-201ENST00000376707 GABARAPH6UMI1 98 aa15.64■□□□□ 0.09
VSX1-201ENST00000376707 NUPL2O15504 423 aaKnown RBP15.64■□□□□ 0.09
VSX1-201ENST00000376707 PGAM2P15259 253 aa15.64■□□□□ 0.09
VSX1-201ENST00000376707 PI3P19957 117 aa15.64■□□□□ 0.09
VSX1-201ENST00000376707 TAS2R19P59542 299 aa15.64■□□□□ 0.09
VSX1-201ENST00000376707 HSPE1P61604 102 aaKnown RBP15.64■□□□□ 0.09
VSX1-201ENST00000376707 MRPS10P82664 201 aaKnown RBP15.64■□□□□ 0.09
VSX1-201ENST00000376707 RELQ04864 619 aaPredicted RBP15.64■□□□□ 0.09
VSX1-201ENST00000376707 CTDSP2O14595 271 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 RGS5O15539 181 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 YIF1AO95070 293 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 CTSGP08311 255 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 P0C879 139 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 FCGR2BP31994 310 aaPredicted RBP15.63■□□□□ 0.09
VSX1-201ENST00000376707 MFAP4P55083 255 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 ODF3L2Q3SX64 289 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 Q6ZWC4 215 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 RAB2BQ8WUD1 216 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 TP53RKQ96S44 253 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 BCL7BQ9BQE9 202 aa15.63■□□□□ 0.09
VSX1-201ENST00000376707 TP53TG1Q9Y2A0 90 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms