RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ZFAND1Q8TCF1 268 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 SCARB1Q8WTV0 552 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 TMEM190Q8WZ59 177 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 SEC22AQ96IW7 307 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 TXN2Q99757 166 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 SPAG8Q99932 426 aaPredicted RBP14.21□□□□□ -0.13
TMEM53-201ENST00000372235 EXTL2Q9UBQ6 330 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 MTFP1Q9UDX5 166 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 MLXQ9UH92 298 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 NSG2Q9Y328 171 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 OR2T8A6NH00 312 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 K7EMT4 169 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 NUPL2O15504 423 aaKnown RBP14.2□□□□□ -0.14
TMEM53-201ENST00000372235 PGAM2P15259 253 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 TAS2R19P59542 299 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 PRCDQ00LT1 54 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 TM4SF20Q53R12 229 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 Q56UQ5 140 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 BTNL8Q6UX41 500 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 UNQ9165/PRO28630Q6UXU0 137 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 GPR141Q7Z602 305 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 CCDC71LQ8N9Z2 235 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 ZNF114Q8NC26 417 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 CACNG8Q8WXS5 425 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 HIPK2Q9H2X6 1198 aa14.2□□□□□ -0.14
TMEM53-201ENST00000372235 FCGR2BP31994 310 aaPredicted RBP14.19□□□□□ -0.14
TMEM53-201ENST00000372235 HSPE1P61604 102 aaKnown RBP14.19□□□□□ -0.14
TMEM53-201ENST00000372235 OR2C3Q8N628 320 aa14.19□□□□□ -0.14
TMEM53-201ENST00000372235 PDCD10Q9BUL8 212 aa14.19□□□□□ -0.14
TMEM53-201ENST00000372235 KLK11Q9UBX7 282 aa14.19□□□□□ -0.14
TMEM53-201ENST00000372235 C15orf62A8K5M9 175 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 M0QYG6 137 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 SCAF4O95104 1147 aaKnown RBP14.18□□□□□ -0.14
TMEM53-201ENST00000372235 MFAP4P55083 255 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 PIGPP57054 158 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 LHFPL1Q86WI0 220 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 TMEM229BQ8NBD8 167 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 UBAC2Q8NBM4 344 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 TERB2Q8NHR7 220 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 MRGPRFQ96AM1 343 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 COPZ2Q9P299 210 aa14.18□□□□□ -0.14
TMEM53-201ENST00000372235 GABARAPH6UMI1 98 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 K7EIM0 57 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 CORTO00230 105 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 TSPAN4O14817 238 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 RGS5O15539 181 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 CD3DP04234 171 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 SMIM18P0DKX4 95 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 EDN2P20800 178 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 BMI1P35226 326 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 SUB1P53999 127 aaKnown RBP eCLIP14.17□□□□□ -0.14
TMEM53-201ENST00000372235 CMC4P56277 68 aaPredicted RBP14.17□□□□□ -0.14
TMEM53-201ENST00000372235 MEF2DQ14814 521 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 OR52I2Q8NH67 350 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 BCL7BQ9BQE9 202 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 GGTLC1Q9BX51 225 aa14.17□□□□□ -0.14
TMEM53-201ENST00000372235 LOC102724200A0A096LPH7 203 aaPredicted RBP14.16□□□□□ -0.14
TMEM53-201ENST00000372235 IGHV3-35A0A0C4DH35 117 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 C3orf85A0A1B0GTC6 90 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 RBMY1BA6NDE4 496 aaKnown RBP14.16□□□□□ -0.14
TMEM53-201ENST00000372235 RBMY1EA6NEQ0 496 aaKnown RBP14.16□□□□□ -0.14
TMEM53-201ENST00000372235 INS-IGF2F8WCM5 200 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 SCGB2A1O75556 95 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 CD5P06127 495 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 RBMY1DP0C7P1 496 aaKnown RBP14.16□□□□□ -0.14
TMEM53-201ENST00000372235 SNCAP37840 140 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 AKR1C2P52895 323 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 MISP3Q96FF7 219 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 FAM110AQ9BQ89 295 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 C20orf24Q9BUV8 137 aa14.16□□□□□ -0.14
TMEM53-201ENST00000372235 NAA50Q9GZZ1 169 aaKnown RBP14.16□□□□□ -0.14
TMEM53-201ENST00000372235 HUWE1Q7Z6Z7 4374 aaKnown RBP14.15□□□□□ -0.14
TMEM53-201ENST00000372235 OR4C46A6NHA9 309 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 RAB3DO95716 219 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 IGKV1-39P01597 117 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 CD74P04233 296 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 IGKV1D-39P04432 117 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 MFAP2P55001 183 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 TRIM16LQ309B1 348 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 SLC35G3Q8N808 338 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 RAB2BQ8WUD1 216 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 RRNAD1Q96FB5 475 aaKnown RBP14.15□□□□□ -0.14
TMEM53-201ENST00000372235 ABHD1Q96SE0 405 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 CACFD1Q9UGQ2 172 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 STAB2Q8WWQ8 2551 aa14.15□□□□□ -0.14
TMEM53-201ENST00000372235 DBX1A6NMT0 343 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 GNG7O60262 68 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 CTSGP08311 255 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 NPBWR1P48145 328 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 APOC4P55056 127 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 SURF2Q15527 256 aaPredicted RBP14.14□□□□□ -0.15
TMEM53-201ENST00000372235 RNASE12Q5GAN4 147 aaKnown RBP14.14□□□□□ -0.15
TMEM53-201ENST00000372235 STEAP1BQ6NZ63 245 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 FAM219AQ8IW50 185 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 DUSP18Q8NEJ0 188 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 CHRDL1Q9BU40 450 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 ENY2Q9NPA8 101 aa14.14□□□□□ -0.15
TMEM53-201ENST00000372235 C14orf166Q9Y224 244 aaKnown RBP14.14□□□□□ -0.15
TMEM53-201ENST00000372235 DISC1C4P0D8 188 aa14.13□□□□□ -0.15
TMEM53-201ENST00000372235 I3L2K1 104 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms