RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TBR1Q16650 682 aa14.35□□□□□ -0.11
CHTOP-203ENST00000368690 GSX1Q9H4S2 264 aaPredicted RBP14.35□□□□□ -0.11
CHTOP-203ENST00000368690 MED13Q9UHV7 2174 aa14.35□□□□□ -0.11
CHTOP-203ENST00000368690 TCF19Q9Y242 345 aa14.35□□□□□ -0.11
CHTOP-203ENST00000368690 A0A1W2PN81 502 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 IGLC7A0M8Q6 106 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 CRYBB3P26998 211 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 LINC00205P59089 165 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 KLF5Q13887 457 aaPredicted RBP14.34□□□□□ -0.11
CHTOP-203ENST00000368690 ABHD12Q8N2K0 398 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 MUC15Q8N387 334 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 SLC24A4Q8NFF2 622 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 C18orf32Q8TCD1 76 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 ALKBH7Q9BT30 221 aaPredicted RBP14.34□□□□□ -0.11
CHTOP-203ENST00000368690 CLEC7AQ9BXN2 247 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 WNT10AQ9GZT5 417 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 RNASE7Q9H1E1 156 aaKnown RBP14.34□□□□□ -0.11
CHTOP-203ENST00000368690 TUBG2Q9NRH3 451 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 C15orf65H3BRN8 121 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 IGLV2-8P01709 118 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 GRPP07492 148 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 TNFSF4P23510 183 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 SSTR5P35346 364 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 PPOXP50336 477 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 FOXC1Q12948 553 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 ACP7Q6ZNF0 438 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 DOLPP1Q86YN1 238 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 Q8TCH9 128 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 C19orf24Q9BVV8 132 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 TECRQ9NZ01 308 aaKnown RBP14.34□□□□□ -0.11
CHTOP-203ENST00000368690 LAMA5O15230 3695 aa14.34□□□□□ -0.11
CHTOP-203ENST00000368690 LOC105371242A0A075B767 164 aa14.33□□□□□ -0.11
CHTOP-203ENST00000368690 H0YJW9 148 aa14.33□□□□□ -0.11
CHTOP-203ENST00000368690 PROP1O75360 226 aa14.33□□□□□ -0.11
CHTOP-203ENST00000368690 HINT1P49773 126 aaPredicted RBP14.33□□□□□ -0.11
CHTOP-203ENST00000368690 FBLN7Q53RD9 439 aa14.33□□□□□ -0.11
CHTOP-203ENST00000368690 IBA57Q5T440 356 aaKnown RBP14.33□□□□□ -0.11
CHTOP-203ENST00000368690 UNQ5815/PRO19632Q6UWF5 114 aa14.33□□□□□ -0.11
CHTOP-203ENST00000368690 LYG1Q8N1E2 194 aa14.33□□□□□ -0.11
CHTOP-203ENST00000368690 OR13A1Q8NGR1 328 aa14.33□□□□□ -0.11
CHTOP-203ENST00000368690 NEUROG1Q92886 237 aa14.33□□□□□ -0.11
CHTOP-203ENST00000368690 ZNF331Q9NQX6 463 aaPredicted RBP14.33□□□□□ -0.11
CHTOP-203ENST00000368690 A0A1W2PRE2 83 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 NPY1RP25929 384 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 PSG5Q15238 335 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 IGF2-ASQ6U949 168 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 Q6ZR03 302 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 MIR17HGQ75NE6 70 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 OR4F17Q8NGA8 305 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 OR8B3Q8NGG8 313 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 IGF2BP2-AS1Q96M15 143 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 OR8B2Q96RD0 313 aa14.33□□□□□ -0.12
CHTOP-203ENST00000368690 TRAV30A0A087WSZ9 112 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.32□□□□□ -0.12
CHTOP-203ENST00000368690 C11orf53Q8IXP5 236 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 TMEM140Q9NV12 185 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 JPT1Q9UK76 154 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 TET2Q6N021 2002 aaPredicted RBP14.32□□□□□ -0.12
CHTOP-203ENST00000368690 IGHV3-43A0A0B4J1X8 118 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 SPINK4O60575 86 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 PPBPP02775 128 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 CELA3AP09093 270 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 IGHV3-43DP0DP04 118 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 USF1P22415 310 aaPredicted RBP14.32□□□□□ -0.12
CHTOP-203ENST00000368690 MRPL54Q6P161 138 aaKnown RBP14.32□□□□□ -0.12
CHTOP-203ENST00000368690 FAM19A2Q8N3H0 131 aa14.32□□□□□ -0.12
CHTOP-203ENST00000368690 FOXA2Q9Y261 457 aaPredicted RBP14.32□□□□□ -0.12
CHTOP-203ENST00000368690 TRAV34A0A0B4J273 112 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 FAM181BA6NEQ2 426 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 C15orf61A6NNL5 157 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 WT1P19544 449 aaPredicted RBP14.31□□□□□ -0.12
CHTOP-203ENST00000368690 NTF3P20783 257 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 TAS2R45P59539 299 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 FXYD3Q14802 87 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 FAM231DQ6ZW35 169 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 FAM90A1Q86YD7 464 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 HES7Q9BYE0 225 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 SAP30LQ9HAJ7 183 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 C1RLQ9NZP8 487 aa14.31□□□□□ -0.12
CHTOP-203ENST00000368690 WNT9BO14905 357 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 SLC25A40Q8TBP6 338 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 S1PR3Q99500 378 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 DEFB108AA8MXU0 73 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 M0R1X1 148 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 OR2J3O76001 311 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 CCL11P51671 97 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 TCL1AP56279 114 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 UBE2G1P62253 170 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 RHOGP84095 191 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 ALKBH6Q3KRA9 238 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 LRRC10Q5BKY1 277 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 FAM162BQ5T6X4 162 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 SPACA3Q8IXA5 215 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 OR4C5Q8NGB2 326 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 MBD6Q96DN6 1003 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 CXXC4Q9H2H0 198 aa14.3□□□□□ -0.12
CHTOP-203ENST00000368690 HSBP1O75506 76 aa14.29□□□□□ -0.12
CHTOP-203ENST00000368690 IGFBP2P18065 325 aa14.29□□□□□ -0.12
CHTOP-203ENST00000368690 HSPE1P61604 102 aaKnown RBP14.29□□□□□ -0.12
CHTOP-203ENST00000368690 ARG2P78540 354 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms