RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 ZNF2Q9BSG1 426 aaPredicted RBP12.05□□□□□ -0.48
H3F3C-201ENST00000340398 EHFQ9NZC4 300 aa12.05□□□□□ -0.48
H3F3C-201ENST00000340398 SMPXQ9UHP9 88 aa12.05□□□□□ -0.48
H3F3C-201ENST00000340398 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
H3F3C-201ENST00000340398 OR4C46A6NHA9 309 aa12.04□□□□□ -0.48
H3F3C-201ENST00000340398 CTSGP08311 255 aa12.04□□□□□ -0.48
H3F3C-201ENST00000340398 FGF2P09038 288 aa12.04□□□□□ -0.48
H3F3C-201ENST00000340398 CBX5P45973 191 aa12.04□□□□□ -0.48
H3F3C-201ENST00000340398 SCAND1P57086 179 aa12.04□□□□□ -0.48
H3F3C-201ENST00000340398 THOC7Q6I9Y2 204 aaKnown RBP12.04□□□□□ -0.48
H3F3C-201ENST00000340398 PHLDA1Q8WV24 401 aaPredicted RBP12.04□□□□□ -0.48
H3F3C-201ENST00000340398 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
H3F3C-201ENST00000340398 DGCR14Q96DF8 476 aaKnown RBP12.04□□□□□ -0.48
H3F3C-201ENST00000340398 GALNT14Q96FL9 552 aa12.04□□□□□ -0.48
H3F3C-201ENST00000340398 CHEK1O14757 476 aa12.03□□□□□ -0.48
H3F3C-201ENST00000340398 XRCC3O43542 346 aa12.03□□□□□ -0.48
H3F3C-201ENST00000340398 SNAPC5O75971 98 aa12.03□□□□□ -0.48
H3F3C-201ENST00000340398 IGHV3-48P01763 117 aa12.03□□□□□ -0.48
H3F3C-201ENST00000340398 TGFBR1P36897 503 aa12.03□□□□□ -0.48
H3F3C-201ENST00000340398 HSD17B13Q7Z5P4 300 aaPredicted RBP12.03□□□□□ -0.48
H3F3C-201ENST00000340398 RHPN1-AS1Q9BWJ2 59 aa12.03□□□□□ -0.48
H3F3C-201ENST00000340398 IFT46Q9NQC8 304 aa12.03□□□□□ -0.48
H3F3C-201ENST00000340398 VPS13DQ5THJ4 4388 aa12.03□□□□□ -0.48
H3F3C-201ENST00000340398 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
H3F3C-201ENST00000340398 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
H3F3C-201ENST00000340398 C15orf62A8K5M9 175 aa12.02□□□□□ -0.49
H3F3C-201ENST00000340398 YIF1AO95070 293 aa12.02□□□□□ -0.49
H3F3C-201ENST00000340398 ATF4P18848 351 aaPredicted RBP12.02□□□□□ -0.49
H3F3C-201ENST00000340398 GBGT1Q8N5D6 347 aa12.02□□□□□ -0.49
H3F3C-201ENST00000340398 MOB3AQ96BX8 217 aa12.02□□□□□ -0.49
H3F3C-201ENST00000340398 S100A16Q96FQ6 103 aaKnown RBP12.02□□□□□ -0.49
H3F3C-201ENST00000340398 CSTL1Q9H114 145 aa12.02□□□□□ -0.49
H3F3C-201ENST00000340398 IGHV7-4-1A0A0J9YVY3 117 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 NANOS2P60321 138 aaKnown RBP12.01□□□□□ -0.49
H3F3C-201ENST00000340398 NEDD8Q15843 81 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 PHLDA2Q53GA4 152 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 LYSMD2Q8IV50 215 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 TMEM116Q8NCL8 245 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 TSPAN14Q8NG11 270 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 SLC25A46Q96AG3 418 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 MISP3Q96FF7 219 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 ATP6V0BQ99437 205 aa12.01□□□□□ -0.49
H3F3C-201ENST00000340398 YTHDF1Q9BYJ9 559 aaKnown RBP12.01□□□□□ -0.49
H3F3C-201ENST00000340398 FAM90A2PQ658T7 463 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 LILRB2Q8N423 598 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 TMEM217Q8N7C4 229 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 OR5H2Q8NGV7 314 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 BORCS5Q969J3 196 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 TMEM56Q96MV1 263 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 RARRES2Q99969 163 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 FXYD6Q9H0Q3 95 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 TMEM14BQ9NUH8 114 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 PRNDQ9UKY0 176 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 ANAPC10Q9UM13 185 aa12□□□□□ -0.49
H3F3C-201ENST00000340398 MPTX1A8MV57 137 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 I3L2K1 104 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 GPR31O00270 319 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 NUPL2O15504 423 aaKnown RBP11.99□□□□□ -0.49
H3F3C-201ENST00000340398 NAT1P18440 290 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 HLA-DMAP28067 261 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 MFAP4P55083 255 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 TAS2R20P59543 309 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 CADM3Q8N126 398 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 OR6F1Q8NGZ6 308 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 OR1P1Q8NH06 330 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 FKBP11Q9NYL4 201 aa11.99□□□□□ -0.49
H3F3C-201ENST00000340398 TRAV14DV4A0A0A6YYC5 116 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 C15orf61A6NNL5 157 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 DEFB4AO15263 64 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 ATP6V1G2O95670 118 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 MT-CO2P00403 227 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 APOHP02749 345 aaPredicted RBP11.98□□□□□ -0.49
H3F3C-201ENST00000340398 RPS19P39019 145 aaKnown RBP11.98□□□□□ -0.49
H3F3C-201ENST00000340398 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
H3F3C-201ENST00000340398 TMEM69Q5SWH9 247 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 LGALS9CQ6DKI2 356 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 SAMD12Q8N8I0 201 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 OR11H2Q8NH07 326 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 C6orf62Q9GZU0 229 aaPredicted RBP11.98□□□□□ -0.49
H3F3C-201ENST00000340398 NXF2Q9GZY0 626 aaKnown RBP11.98□□□□□ -0.49
H3F3C-201ENST00000340398 FBXL17Q9UF56 701 aa11.98□□□□□ -0.49
H3F3C-201ENST00000340398 IGKV1-39P01597 117 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 IGKV1D-39P04432 117 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 PRSS3P35030 304 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 HRH1P35367 487 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 LSM3P62310 102 aaKnown RBP11.97□□□□□ -0.49
H3F3C-201ENST00000340398 IZUMO4Q1ZYL8 232 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 UBE2NLQ5JXB2 153 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 TCF24Q7RTU0 167 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 TBC1D26Q86UD7 250 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 C11orf45Q8TAV5 145 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 PINX1Q96BK5 328 aaKnown RBP11.97□□□□□ -0.49
H3F3C-201ENST00000340398 SEC22AQ96IW7 307 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 Q9H521 79 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 AGRNO00468 2067 aa11.97□□□□□ -0.49
H3F3C-201ENST00000340398 IGHV3-66A0A0C4DH42 116 aa11.96□□□□□ -0.49
H3F3C-201ENST00000340398 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms