RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 DBX1A6NMT0 343 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 FAM25AB3EWG3 89 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 FAM25CB3EWG5 89 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 FAM25GB3EWG6 89 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 F8W735 103 aaPredicted RBP13.29□□□□□ -0.28
HDDC3-201ENST00000330334 K7EIM0 57 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 K7EMT4 169 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 NDUFA4O00483 81 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 IGKV1-39P01597 117 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 IGKV1D-39P04432 117 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 SMIM18P0DKX4 95 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 BTNL8Q6UX41 500 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 RBPMS2Q6ZRY4 209 aaKnown RBP13.29□□□□□ -0.28
HDDC3-201ENST00000330334 H2BFWTQ7Z2G1 175 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 LHFPL1Q86WI0 220 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 ARRDC1Q8N5I2 433 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 DAZ1Q9NQZ3 744 aaKnown RBP13.29□□□□□ -0.28
HDDC3-201ENST00000330334 KLK11Q9UBX7 282 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 MTFP1Q9UDX5 166 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 SACSQ9NZJ4 4579 aa13.29□□□□□ -0.28
HDDC3-201ENST00000330334 FCGR2BP31994 310 aaPredicted RBP13.28□□□□□ -0.28
HDDC3-201ENST00000330334 OR2C3Q8N628 320 aa13.28□□□□□ -0.28
HDDC3-201ENST00000330334 ZNF114Q8NC26 417 aa13.28□□□□□ -0.28
HDDC3-201ENST00000330334 OR4A16Q8NH70 328 aa13.28□□□□□ -0.28
HDDC3-201ENST00000330334 IL17DQ8TAD2 202 aa13.28□□□□□ -0.28
HDDC3-201ENST00000330334 SPAG8Q99932 426 aaPredicted RBP13.28□□□□□ -0.28
HDDC3-201ENST00000330334 NAA50Q9GZZ1 169 aaKnown RBP13.28□□□□□ -0.28
HDDC3-201ENST00000330334 WFDC10AQ9H1F0 79 aa13.28□□□□□ -0.28
HDDC3-201ENST00000330334 IGHV3-35A0A0C4DH35 117 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 M0QYG6 137 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 SCAF4O95104 1147 aaKnown RBP13.27□□□□□ -0.29
HDDC3-201ENST00000330334 ADMP35318 185 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 HSPE1P61604 102 aaKnown RBP13.27□□□□□ -0.29
HDDC3-201ENST00000330334 PRCDQ00LT1 54 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 RNASE10Q5GAN6 216 aaKnown RBP13.27□□□□□ -0.29
HDDC3-201ENST00000330334 GPR107Q5VW38 600 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 OR52I2Q8NH67 350 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 ABHD1Q96SE0 405 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 TXN2Q99757 166 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 CHRDL1Q9BU40 450 aa13.27□□□□□ -0.29
HDDC3-201ENST00000330334 C15orf62A8K5M9 175 aa13.26□□□□□ -0.29
HDDC3-201ENST00000330334 TSPAN4O14817 238 aa13.26□□□□□ -0.29
HDDC3-201ENST00000330334 CTSGP08311 255 aa13.26□□□□□ -0.29
HDDC3-201ENST00000330334 LAMTOR1Q6IAA8 161 aa13.26□□□□□ -0.29
HDDC3-201ENST00000330334 MRGPRFQ96AM1 343 aa13.26□□□□□ -0.29
HDDC3-201ENST00000330334 EXTL2Q9UBQ6 330 aa13.26□□□□□ -0.29
HDDC3-201ENST00000330334 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 I3L2K1 104 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 CD74P04233 296 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 CD3DP04234 171 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 PIGPP57054 158 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 ERHP84090 104 aaKnown RBP13.25□□□□□ -0.29
HDDC3-201ENST00000330334 SSBP1Q04837 148 aaKnown RBP13.25□□□□□ -0.29
HDDC3-201ENST00000330334 RELQ04864 619 aaPredicted RBP13.25□□□□□ -0.29
HDDC3-201ENST00000330334 ZFAND6Q6FIF0 208 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 TMEM229BQ8NBD8 167 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 TERB2Q8NHR7 220 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 GGTLC1Q9BX51 225 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 RETNQ9HD89 108 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 SELENOKQ9Y6D0 94 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 STARD9Q9P2P6 4700 aa13.25□□□□□ -0.29
HDDC3-201ENST00000330334 LOC102724200A0A096LPH7 203 aaPredicted RBP13.24□□□□□ -0.29
HDDC3-201ENST00000330334 IGHV3-21A0A0B4J1V1 117 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 LCE6AA0A183 80 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 NUPL2O15504 423 aaKnown RBP13.24□□□□□ -0.29
HDDC3-201ENST00000330334 B3GALNT1O75752 331 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 ATG12O94817 140 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 P0C879 139 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 PGAM2P15259 253 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 ALDH3B2P48448 385 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 MFAP4P55083 255 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 Q56UQ5 140 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 ZFAND1Q8TCF1 268 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 FAM110AQ9BQ89 295 aa13.24□□□□□ -0.29
HDDC3-201ENST00000330334 MRPS26Q9BYN8 205 aaKnown RBP13.24□□□□□ -0.29
HDDC3-201ENST00000330334 GABARAPH6UMI1 98 aa13.23□□□□□ -0.29
HDDC3-201ENST00000330334 TAS2R19P59542 299 aa13.23□□□□□ -0.29
HDDC3-201ENST00000330334 MRPS10P82664 201 aaKnown RBP13.23□□□□□ -0.29
HDDC3-201ENST00000330334 GPR141Q7Z602 305 aa13.23□□□□□ -0.29
HDDC3-201ENST00000330334 UBAC2Q8NBM4 344 aa13.23□□□□□ -0.29
HDDC3-201ENST00000330334 OR10C1Q96KK4 312 aa13.23□□□□□ -0.29
HDDC3-201ENST00000330334 TP53RKQ96S44 253 aa13.23□□□□□ -0.29
HDDC3-201ENST00000330334 RYR2Q92736 4967 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 A0A0B4J293 547 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 C3orf85A0A1B0GTC6 90 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 IGKV1-5P01602 117 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 PI3P19957 117 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 MISP3Q96FF7 219 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 ZNF414Q96IQ9 312 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 NXF2Q9GZY0 626 aaKnown RBP13.22□□□□□ -0.29
HDDC3-201ENST00000330334 MIXL1Q9H2W2 232 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 SMPXQ9UHP9 88 aa13.22□□□□□ -0.29
HDDC3-201ENST00000330334 RAB3DO95716 219 aa13.21□□□□□ -0.29
HDDC3-201ENST00000330334 MT-CO2P00403 227 aa13.21□□□□□ -0.29
HDDC3-201ENST00000330334 RNASE12Q5GAN4 147 aaKnown RBP13.21□□□□□ -0.29
HDDC3-201ENST00000330334 STEAP1BQ6NZ63 245 aa13.21□□□□□ -0.29
HDDC3-201ENST00000330334 CCDC71LQ8N9Z2 235 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms