RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 KIR2DS4P43632 304 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 ATP5G3P48201 142 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 TCL1AP56279 114 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 RBM11P57052 281 aaKnown RBP5.51□□□□□ -1.53
ZNF540-201ENST00000316433 ZFAND6Q6FIF0 208 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 C6orf15Q6UXA7 325 aaPredicted RBP5.51□□□□□ -1.53
ZNF540-201ENST00000316433 LINC00696Q6ZRV3 163 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 SMRP1Q8NCR6 262 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 TAF15Q92804 592 aaKnown RBP eCLIP5.51□□□□□ -1.53
ZNF540-201ENST00000316433 OR2W1Q9Y3N9 320 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 CHCHD2Q9Y6H1 151 aaPredicted RBP5.51□□□□□ -1.53
ZNF540-201ENST00000316433 R4GN57 208 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 KIR2DS1A0A191URI9 304 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 FAM90A27PA6NNH2 459 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 CCDC179H3BU77 68 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 FOXH1O75593 365 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 CEACAM4O75871 244 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 IGHV3-7P01780 117 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 CD38P28907 300 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 PLA2G5P39877 138 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 HBG1P69891 147 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 HBG2P69892 147 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 KIR2DS1Q14954 304 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF295-AS1Q8N0V1 137 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 SHISA5Q8N114 240 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.51□□□□□ -1.53
ZNF540-201ENST00000316433 OR10G9Q8NGN4 311 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 OR10G7Q8NGN6 311 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 OR4A16Q8NH70 328 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 HDHD3Q9BSH5 251 aaPredicted RBP5.51□□□□□ -1.53
ZNF540-201ENST00000316433 FOXQ1Q9C009 403 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 TNFRSF19Q9NS68 423 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 KCNS2Q9ULS6 477 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 A0A1W2PRD5 423 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 A0A1W2PRF3 423 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 A0A1W2PRM7 423 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 RER1O15258 196 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 CELA2BP08218 269 aaPredicted RBP5.51□□□□□ -1.53
ZNF540-201ENST00000316433 HERV-K104P61576 105 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 ARL16Q0P5N6 197 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF146Q15072 292 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF766Q5HY98 468 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 FAM120AOSQ5T036 256 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 FAM69BQ5VUD6 431 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 RABAC1Q9UI14 185 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 LY96Q9Y6Y9 160 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 NCKAP5O14513 1909 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 PCDH15Q96QU1 1955 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 ARHGEF17Q96PE2 2063 aaPredicted RBP5.51□□□□□ -1.53
ZNF540-201ENST00000316433 CT45A10P0DMU9 189 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 EIF4EBP1Q13541 118 aaPredicted RBP5.5□□□□□ -1.53
ZNF540-201ENST00000316433 Q6AWC8 147 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 TEX29Q8N6K0 151 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 Q8TCH9 128 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 PATE1Q8WXA2 126 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 OR4C12Q96R67 309 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 V9GYV3 84 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 PCNX3Q9H6A9 2034 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF816-ZNF321PA0A0X1KG74 233 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 UBE2L5PA0A1B0GUS4 154 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 C11orf98E9PRG8 122 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 FNDC10F2Z333 226 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 K7EN84 100 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 THBDP07204 575 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 NTF4P34130 210 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 B3GALT5-AS1P59052 145 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 CFHR1Q03591 330 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 SRSF1Q07955 248 aaKnown RBP eCLIP5.5□□□□□ -1.53
ZNF540-201ENST00000316433 KLF5Q13887 457 aaPredicted RBP5.5□□□□□ -1.53
ZNF540-201ENST00000316433 TRIP6Q15654 476 aaKnown RBP5.5□□□□□ -1.53
ZNF540-201ENST00000316433 CR1LQ2VPA4 569 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF502Q8TBZ5 544 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 NANOS1Q8WY41 292 aaKnown RBP5.5□□□□□ -1.53
ZNF540-201ENST00000316433 ATG2BQ96BY7 2078 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 IMMP1LQ96LU5 166 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 SAP30LQ9HAJ7 183 aa5.5□□□□□ -1.53
ZNF540-201ENST00000316433 TECRQ9NZ01 308 aaKnown RBP5.5□□□□□ -1.53
ZNF540-201ENST00000316433 CENPVL3A0A0U1RRI6 287 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 TNFSF11O14788 317 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 IGHG4P01861 327 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 SMIM13P0DJ93 91 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 MGST1P10620 155 aaKnown RBP5.49□□□□□ -1.53
ZNF540-201ENST00000316433 LIFP15018 202 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 FGF12P61328 243 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 IL11RAQ14626 422 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 C6orf201Q7Z4U5 140 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 OSR2Q8N2R0 312 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 NAT6Q93015 286 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 SPANXA1Q9NS26 97 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 OR1A1Q9P1Q5 309 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 A0A1W2PRE2 83 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 SMIM9A6NGZ8 99 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 C3orf80F5H4A9 247 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 M0R135 149 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 WISP1O95388 367 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 FGF6P10767 208 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 SLC35B1P78383 322 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 ANXA2RQ3ZCQ2 193 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 DMRTC1Q5HYR2 192 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF799Q96GE5 643 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms