RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 SNRNP40Q96DI7 357 aaKnown RBP12.43□□□□□ -0.42
PDPK1-201ENST00000268673 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
PDPK1-201ENST00000268673 STAG3L2P0CL84 134 aa12.43□□□□□ -0.42
PDPK1-201ENST00000268673 STAG3L3P0CL85 134 aa12.43□□□□□ -0.42
PDPK1-201ENST00000268673 BMI1P35226 326 aa12.43□□□□□ -0.42
PDPK1-201ENST00000268673 GPR6P46095 362 aaPredicted RBP12.43□□□□□ -0.42
PDPK1-201ENST00000268673 COMPP49747 757 aaPredicted RBP12.43□□□□□ -0.42
PDPK1-201ENST00000268673 RNASE7Q9H1E1 156 aaKnown RBP12.43□□□□□ -0.42
PDPK1-201ENST00000268673 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 GNG7O60262 68 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 RAMP3O60896 148 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 SLC25A33Q9BSK2 321 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 TNFRSF19Q9NS68 423 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 POLR3KQ9Y2Y1 108 aaPredicted RBP12.42□□□□□ -0.42
PDPK1-201ENST00000268673 TMPRSS3P57727 454 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 ARF6P62330 175 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 MIR17HGQ75NE6 70 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 DIRC2Q96SL1 478 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 SCNM1Q9BWG6 230 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 A0A1W2PRS3 328 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 GCSAMLQ5JQS6 135 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 RAB37Q96AX2 223 aa12.42□□□□□ -0.42
PDPK1-201ENST00000268673 C9JCJ5 164 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 ST6GALNAC6Q969X2 333 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 IMMP1LQ96LU5 166 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 ZNF581Q9P0T4 197 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 ANAPC1Q9H1A4 1944 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 TRBV6-6A0A0A6YYG2 114 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 ZNF716A6NP11 495 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 PEX7O00628 323 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 TYMSP04818 313 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 ACP7Q6ZNF0 438 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 FAM222BQ8WU58 562 aa12.41□□□□□ -0.42
PDPK1-201ENST00000268673 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 TMEM144Q7Z5S9 345 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 CREBBPQ92793 2442 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 PHF3Q92576 2039 aaKnown RBP12.4□□□□□ -0.42
PDPK1-201ENST00000268673 WNT9BO14905 357 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 RPL39P5Q59GN2 51 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 DIDO1Q9BTC0 2240 aaKnown RBP12.4□□□□□ -0.42
PDPK1-201ENST00000268673 A1L4Q6 167 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 ST6GALNAC3Q8NDV1 305 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 MYOZ3Q8TDC0 251 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 ORAOV1Q8WV07 137 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 LY96Q9Y6Y9 160 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 A0A0G2JRQ6 117 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 A0A1W2PRE2 83 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 ORM1P02763 201 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 SMIM17P0DL12 118 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 GCSHP23434 173 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 EFNB3Q15768 340 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 OR13A1Q8NGR1 328 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 DERL1Q9BUN8 251 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 IFI27L2Q9H2X8 130 aa12.4□□□□□ -0.42
PDPK1-201ENST00000268673 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 FAM90A9PA6NNJ1 464 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 TMEM50AO95807 157 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 APELAP0DMC3 54 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 RPL27AP46776 148 aaKnown RBP12.39□□□□□ -0.43
PDPK1-201ENST00000268673 MRPL14Q6P1L8 145 aaKnown RBP12.39□□□□□ -0.43
PDPK1-201ENST00000268673 FOXL2NBQ6ZUU3 175 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 DPF1Q92782 380 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 IDI2-AS1Q9NZ38 188 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 COL4A4P53420 1690 aaPredicted RBP12.39□□□□□ -0.43
PDPK1-201ENST00000268673 TMEM189A5PLL7 270 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 CELA3AP09093 270 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 MC5RP33032 325 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.39□□□□□ -0.43
PDPK1-201ENST00000268673 SRSF12Q8WXF0 261 aaKnown RBP12.39□□□□□ -0.43
PDPK1-201ENST00000268673 NPIPB3Q92617 1050 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 ZNF714Q96N38 554 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 LIME1Q9H400 295 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 DEPPQ9NTK1 212 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 MRPS18CQ9Y3D5 142 aaKnown RBP12.39□□□□□ -0.43
PDPK1-201ENST00000268673 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.431e-8■■□□□ 11.9
PDPK1-201ENST00000268673 CKS2P33552 79 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 TCTAP57738 103 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 LDLRAD2Q5SZI1 272 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 FANCMQ8IYD8 2048 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 FGFBP3Q8TAT2 258 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 ST20Q9HBF5 79 aa12.39□□□□□ -0.43
PDPK1-201ENST00000268673 BDP1A6H8Y1 2624 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 HIGD1CA8MV81 97 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 CDPF1Q6NVV7 123 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 TREML4Q6UXN2 200 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 SCGB1D4Q6XE38 83 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 Q6ZRM9 215 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 SGK494Q96LW2 274 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 NEU1Q99519 415 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 SH2D7A6NKC9 451 aaPredicted RBP12.38□□□□□ -0.43
PDPK1-201ENST00000268673 CD33P20138 364 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 Q1RN00 199 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 CACNG8Q8WXS5 425 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 WNK2Q9Y3S1 2297 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 KIR2DL2P43627 348 aaPredicted RBP12.38□□□□□ -0.43
PDPK1-201ENST00000268673 UBE2V1Q13404 147 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 CCDC144NLQ6NUI1 221 aa12.38□□□□□ -0.43
PDPK1-201ENST00000268673 TMEM105Q8N8V8 129 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms