RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 RNASEH2CQ8TDP1 164 aaKnown RBP18.74■□□□□ 0.59
MSX2-201ENST00000239243 RITA1Q96K30 269 aa18.74■□□□□ 0.59
MSX2-201ENST00000239243 EIF3GO75821 320 aaKnown RBP eCLIP18.74■□□□□ 0.59
MSX2-201ENST00000239243 PRB3Q04118 309 aaPredicted RBP18.74■□□□□ 0.59
MSX2-201ENST00000239243 FAM90A2PQ658T7 463 aa18.74■□□□□ 0.59
MSX2-201ENST00000239243 IQCF2Q8IXL9 164 aa18.74■□□□□ 0.59
MSX2-201ENST00000239243 STPG3Q8N7X2 389 aa18.74■□□□□ 0.59
MSX2-201ENST00000239243 DPM3Q9P2X0 92 aa18.74■□□□□ 0.59
MSX2-201ENST00000239243 HRNRQ86YZ3 2850 aaPredicted RBP18.74■□□□□ 0.59
MSX2-201ENST00000239243 LOC105371267A0A1B0GV96 52 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 PRSS8Q16651 343 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 GCSAMLQ5JQS6 135 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 TPTE2P1Q5T6R2 138 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 SSMEM1Q8WWF3 244 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 TMPRSS5Q9H3S3 457 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 CGB1A6NKQ9 187 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 E7EUB6 86 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 CRYGBP07316 175 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 WT1-ASQ06250 92 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 PNRC1Q12796 327 aaPredicted RBP18.73■□□□□ 0.59
MSX2-201ENST00000239243 PSG5Q15238 335 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 SIRT7Q9NRC8 400 aa18.73■□□□□ 0.59
MSX2-201ENST00000239243 TMEM250H0YL14 139 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 AKR1C3P42330 323 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 PRR20EP86478 221 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 PRR20CP86479 221 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 PRR20DP86480 221 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 PRR20BP86481 221 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 PRR20AP86496 221 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 C10orf55Q5SWW7 151 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 SLC35E1Q96K37 410 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 TPSG1Q9NRR2 321 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 SIGLEC9Q9Y336 463 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 A0A1W2PPI3 338 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 GAMTQ14353 236 aa18.72■□□□□ 0.59
MSX2-201ENST00000239243 NDUFS7O75251 213 aa18.71■□□□□ 0.59
MSX2-201ENST00000239243 CD81P60033 236 aa18.71■□□□□ 0.59
MSX2-201ENST00000239243 RHOBP62745 196 aa18.71■□□□□ 0.59
MSX2-201ENST00000239243 MRGPRG-AS1Q2M3A8 158 aa18.71■□□□□ 0.59
MSX2-201ENST00000239243 SLC16A13Q7RTY0 426 aa18.71■□□□□ 0.59
MSX2-201ENST00000239243 LRBAP50851 2863 aa18.71■□□□□ 0.59
MSX2-201ENST00000239243 CXorf1O96002 111 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 STAG3L2P0CL84 134 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 STAG3L3P0CL85 134 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 DEFA4P12838 97 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 RPL27AP46776 148 aaKnown RBP18.7■□□□□ 0.58
MSX2-201ENST00000239243 NANPQ8TBE9 248 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 SLC45A2Q9UMX9 530 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 A0A087WWC5 75 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 ODF3BA8MYP8 253 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 B4DEV8 164 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 IGHV2-5P01817 119 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 PPP1R27Q86WC6 154 aa18.7■□□□□ 0.58
MSX2-201ENST00000239243 METTL1Q9UBP6 276 aaKnown RBP18.7■□□□□ 0.58
MSX2-201ENST00000239243 PLA2G5P39877 138 aa18.69■□□□□ 0.58
MSX2-201ENST00000239243 TNXAQ16473 311 aa18.69■□□□□ 0.58
MSX2-201ENST00000239243 MT-CO2P00403 227 aa18.69■□□□□ 0.58
MSX2-201ENST00000239243 COMPP49747 757 aaPredicted RBP18.69■□□□□ 0.58
MSX2-201ENST00000239243 COLCA2A8K830 154 aa18.68■□□□□ 0.58
MSX2-201ENST00000239243 OVOL3O00110 214 aa18.68■□□□□ 0.58
MSX2-201ENST00000239243 ZNF114Q8NC26 417 aa18.68■□□□□ 0.58
MSX2-201ENST00000239243 TXNDC17Q9BRA2 123 aa18.68■□□□□ 0.58
MSX2-201ENST00000239243 C19orf24Q9BVV8 132 aa18.68■□□□□ 0.58
MSX2-201ENST00000239243 TIMM23O14925 209 aa18.68■□□□□ 0.58
MSX2-201ENST00000239243 PAGE4O60829 102 aa18.68■□□□□ 0.58
MSX2-201ENST00000239243 CNTFRP26992 372 aa18.68■□□□□ 0.58
MSX2-201ENST00000239243 IGLC7A0M8Q6 106 aa18.67■□□□□ 0.58
MSX2-201ENST00000239243 ZNF727A8MUV8 499 aa18.67■□□□□ 0.58
MSX2-201ENST00000239243 SPNS3Q6ZMD2 512 aa18.67■□□□□ 0.58
MSX2-201ENST00000239243 OR4F5Q8NH21 305 aa18.67■□□□□ 0.58
MSX2-201ENST00000239243 ABHD5Q8WTS1 349 aa18.67■□□□□ 0.58
MSX2-201ENST00000239243 OR4F4Q96R69 305 aa18.67■□□□□ 0.58
MSX2-201ENST00000239243 VENTXO95231 258 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 LINC00869P0C866 280 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 ARL14EPLP0DKL9 152 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 OR10J1P30954 320 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 HABP2Q14520 560 aaPredicted RBP18.66■□□□□ 0.58
MSX2-201ENST00000239243 ETFRF1Q6IPR1 90 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 HCP5Q6MZN7 132 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 IGKV1OR2-108A0A075B7D4 117 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 MT-ND4LP03901 98 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 CCDC144NLQ6NUI1 221 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 VMO1Q7Z5L0 202 aa18.66■□□□□ 0.58
MSX2-201ENST00000239243 OOSP1A8MZH6 123 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 C11orf94C9JXX5 98 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 PDE6DO43924 150 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 KLRD1Q13241 179 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 LDLRAD2Q5SZI1 272 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 GATAD1Q8WUU5 269 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 SMIM7Q9BQ49 75 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 MLXQ9UH92 298 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 ZFP36P26651 326 aaKnown RBP18.65■□□□□ 0.58
MSX2-201ENST00000239243 PLGLAQ15195 96 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 PVRIGQ6DKI7 326 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 ACY3Q96HD9 319 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 SDF2L1Q9HCN8 221 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 NAT8Q9UHE5 227 aa18.65■□□□□ 0.58
MSX2-201ENST00000239243 CORTO00230 105 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 OR2C1O95371 312 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 MLANAQ16655 118 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms