RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 F12P00748 615 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 PLA2G3Q9NZ20 509 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 IGHV3-21A0A0B4J1V1 117 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 KIAA1644Q3SXP7 199 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 SP9P0CG40 484 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 MIC13Q5XKP0 118 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 NHP2Q9NX24 153 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 RIPPLY3P57055 190 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 IFITM2Q01629 132 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 R4GN57 208 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 SIGLEC1Q9BZZ2 1709 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 REG1BP48304 166 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 SPINK14Q6IE38 97 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 RPP21Q9H633 154 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 FNDC4Q9H6D8 234 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 F2Z2F3 143 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 IL6RP08887 468 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 PLXNA3P51805 1871 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 TRGV2A0A075B6R0 118 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 HIGD1CA8MV81 97 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 TMEM252Q8N6L7 170 aa16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 SEPSECSQ9HD40 501 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-257ENST00000638009 PAPPA2Q9BXP8 1791 aa16.62■□□□□ 0.25
CACNA1A-257ENST00000638009 WDR54Q9H977 334 aa16.62■□□□□ 0.25
CACNA1A-257ENST00000638009 TMEM155Q4W5P6 130 aa16.62■□□□□ 0.25
CACNA1A-257ENST00000638009 GSN-AS1Q9NRJ2 163 aa16.62■□□□□ 0.25
CACNA1A-257ENST00000638009 CD8AP01732 235 aa16.62■□□□□ 0.25
CACNA1A-257ENST00000638009 HCP5Q6MZN7 132 aa16.62■□□□□ 0.25
CACNA1A-257ENST00000638009 SLC25A38Q96DW6 304 aa16.62■□□□□ 0.25
CACNA1A-257ENST00000638009 SOX8P57073 446 aa16.62■□□□□ 0.25
CACNA1A-257ENST00000638009 HBDP02042 147 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 C2orf68Q2NKX9 166 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 FGFRL1Q8N441 504 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 A0A1W2PRD5 423 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 A0A1W2PRF3 423 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 A0A1W2PRM7 423 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 IL11P20809 199 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 WDYHV1Q96HA8 205 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 CLEC7AQ9BXN2 247 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 RND2P52198 227 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 LDLRAD1Q5T700 205 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 FER1L6-AS1Q8NA97 138 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 NKG7Q16617 165 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 IZUMO1RA6ND01 250 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 C9JCJ5 164 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 PRRT4C9JH25 899 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 LEPROTO15243 131 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 DCAF10Q5QP82 559 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 CENPVQ7Z7K6 275 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 DRAM1Q8N682 238 aa16.61■□□□□ 0.25
CACNA1A-257ENST00000638009 RND3P61587 244 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 FOXC1Q12948 553 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 EXPH5Q8NEV8 1989 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 ATG4DQ86TL0 474 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 PEMTQ9UBM1 199 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 VKORC1Q9BQB6 163 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 IGHV3OR15-7A0A075B7D8 119 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 RUNX1Q01196 453 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 RSPO3Q9BXY4 272 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 MEX3AA1L020 520 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 RHOGP84095 191 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 MESP2Q0VG99 397 aa16.6■□□□□ 0.25
CACNA1A-257ENST00000638009 ESDP10768 282 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 COX6B1P14854 86 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 TM4SF4P48230 202 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 FAM27BQ5VT28 67 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 GUSBP11Q6P575 273 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 RBM38Q9H0Z9 239 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 SIRT4Q9Y6E7 314 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 TRAV9-2A0A087WT02 112 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 ZNF660Q6AZW8 331 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 RASL10BQ96S79 203 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 NDUFAF3Q9BU61 184 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 TMEM229AB2RXF0 380 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 H0YL77 283 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 CACNG8Q8WXS5 425 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 ARPC1AQ92747 370 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 SHISA8B8ZZ34 492 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 CD69Q07108 199 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 ZNF479Q96JC4 524 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 TRAV24A0A0B4J272 114 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 DSCAMO60469 2012 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 FOXH1O75593 365 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 TLNRD1Q9H1K6 362 aa16.59■□□□□ 0.25
CACNA1A-257ENST00000638009 IGLV3-16A0A075B6K0 115 aa16.58■□□□□ 0.25
CACNA1A-257ENST00000638009 PRR32B1ATL7 298 aa16.58■□□□□ 0.25
CACNA1A-257ENST00000638009 BGLAPP02818 100 aa16.58■□□□□ 0.25
CACNA1A-257ENST00000638009 NBEAP1P0C6P0 100 aa16.58■□□□□ 0.25
CACNA1A-257ENST00000638009 MRAPQ8TCY5 172 aa16.58■□□□□ 0.25
CACNA1A-257ENST00000638009 PLSCR4Q9NRQ2 329 aa16.58■□□□□ 0.25
CACNA1A-257ENST00000638009 KLK13Q9UKR3 277 aa16.58■□□□□ 0.25
CACNA1A-257ENST00000638009 HS3ST3B1Q9Y662 390 aa16.58■□□□□ 0.25
CACNA1A-257ENST00000638009 PTP4A3O75365 173 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 THSD4Q6ZMP0 1018 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 NABP2Q9BQ15 211 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 LOC390937A0A1W2PQ73 354 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 CCL4L1Q8NHW4 92 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 TM4SF5O14894 197 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 VSIG8P0DPA2 414 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 GCHFRP30047 84 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms