RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CD81P60033 236 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 HAGHQ16775 308 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 MUC7Q8TAX7 377 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 ZNF502Q8TBZ5 544 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 CXorf58Q96LI9 332 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 HINT2Q9BX68 163 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 TUBA4BQ9H853 241 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 PLEKHA3Q9HB20 300 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 DNAH7Q8WXX0 4024 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 TRBV7-1A0A0A6YYK4 115 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 TMEM213A2RRL7 107 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 M0QYG6 137 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 CBLN1P23435 193 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 GPR183P32249 361 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 GUCA2BQ16661 112 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 FAM106AQ4KMX7 169 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 GPR107Q5VW38 600 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 UNQ9165/PRO28630Q6UXU0 137 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 TBC1D26Q86UD7 250 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 GDPD1Q8N9F7 314 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 OR1L8Q8NGR8 309 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 WDR89Q96FK6 387 aaPredicted RBP12.94□□□□□ -0.34
HMGN3-203ENST00000620514 NEURL2Q9BR09 285 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 WFDC10AQ9H1F0 79 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 NDUFA4L2Q9NRX3 87 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 OR51B2Q9Y5P1 312 aa12.94□□□□□ -0.34
HMGN3-203ENST00000620514 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
HMGN3-203ENST00000620514 DBX1A6NMT0 343 aa12.93□□□□□ -0.34
HMGN3-203ENST00000620514 SERPINE2P07093 398 aa12.93□□□□□ -0.34
HMGN3-203ENST00000620514 PTBP1P26599 531 aaKnown RBP eCLIP12.93□□□□□ -0.34
HMGN3-203ENST00000620514 MFAP2P55001 183 aa12.93□□□□□ -0.34
HMGN3-203ENST00000620514 THOC7Q6I9Y2 204 aaKnown RBP12.93□□□□□ -0.34
HMGN3-203ENST00000620514 SLC25A24Q6NUK1 477 aa12.93□□□□□ -0.34
HMGN3-203ENST00000620514 MZT2AQ6P582 158 aa12.93□□□□□ -0.34
HMGN3-203ENST00000620514 TECRQ9NZ01 308 aaKnown RBP12.93□□□□□ -0.34
HMGN3-203ENST00000620514 IGHV3-21A0A0B4J1V1 117 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 A8MWP6 167 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 SNAPC5O75971 98 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 ZNF182P17025 639 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-203ENST00000620514 UCP3P55916 312 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 TM4SF20Q53R12 229 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 LPCAT3Q6P1A2 487 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 LAX1Q8IWV1 398 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 CADM3Q8N126 398 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 DEFB125Q8N687 156 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 UXS1Q8NBZ7 420 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 LSM10Q969L4 123 aaKnown RBP12.92□□□□□ -0.34
HMGN3-203ENST00000620514 CITED4Q96RK1 184 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 THYN1Q9P016 225 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 EXTL2Q9UBQ6 330 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 KLK11Q9UBX7 282 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 MLXQ9UH92 298 aa12.92□□□□□ -0.34
HMGN3-203ENST00000620514 TPPPO94811 219 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 CASC10Q5T4H9 136 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 PLET1Q6UQ28 207 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 LINC00322Q6ZN03 302 aaPredicted RBP12.91□□□□□ -0.34
HMGN3-203ENST00000620514 HSD17B13Q7Z5P4 300 aaPredicted RBP12.91□□□□□ -0.34
HMGN3-203ENST00000620514 SLC38A6Q8IZM9 456 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 TMEM61Q8N0U2 210 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 OR52I2Q8NH67 350 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 VN1R17PQ8TDU5 208 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 AP3S1Q92572 193 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 RETNQ9HD89 108 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 SLC2A8Q9NY64 477 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 PRNDQ9UKY0 176 aa12.91□□□□□ -0.34
HMGN3-203ENST00000620514 F11RQ9Y624 299 aaKnown RBP12.91□□□□□ -0.34
HMGN3-203ENST00000620514 OR2T8A6NH00 312 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 TGOLN2O43493 480 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 CD3DP04234 171 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 S100GP29377 79 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 ZNF57Q68EA5 555 aaPredicted RBP12.9□□□□□ -0.34
HMGN3-203ENST00000620514 BTNL8Q6UX41 500 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 ABHD1Q96SE0 405 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 EDA2RQ9HAV5 297 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 TMEM14BQ9NUH8 114 aa12.9□□□□□ -0.34
HMGN3-203ENST00000620514 RBMY1BA6NDE4 496 aaKnown RBP12.89□□□□□ -0.35
HMGN3-203ENST00000620514 RBMY1EA6NEQ0 496 aaKnown RBP12.89□□□□□ -0.35
HMGN3-203ENST00000620514 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 OR11H12B2RN74 326 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 CYB5BO43169 146 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 RBMY1DP0C7P1 496 aaKnown RBP12.89□□□□□ -0.35
HMGN3-203ENST00000620514 PI3P19957 117 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 ALDH3B2P48448 385 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 LHFPL1Q86WI0 220 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 OR5B3Q8NH48 314 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 SCARB1Q8WTV0 552 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 MRGPRFQ96AM1 343 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 MRPS26Q9BYN8 205 aaKnown RBP12.89□□□□□ -0.35
HMGN3-203ENST00000620514 ZNF436Q9C0F3 470 aaPredicted RBP12.89□□□□□ -0.35
HMGN3-203ENST00000620514 MIXL1Q9H2W2 232 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 SRD5A3Q9H8P0 318 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 FAM212BQ9NTI7 297 aaPredicted RBP12.89□□□□□ -0.35
HMGN3-203ENST00000620514 CEPT1Q9Y6K0 416 aa12.89□□□□□ -0.35
HMGN3-203ENST00000620514 K7EIM0 57 aa12.88□□□□□ -0.35
HMGN3-203ENST00000620514 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
HMGN3-203ENST00000620514 IFNA6P05013 189 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 604.1 ms