RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ARAP3Q8WWN8 1544 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 ROBO3Q96MS0 1386 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 CEP152O94986 1710 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 ADAMTSL1Q8N6G6 1762 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 NUP160Q12769 1436 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 IGKV1-12A0A0C4DH73 117 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 A0A1B0GU33 70 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 A0A1W2PRE2 83 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 VPS37CA5D8V6 355 aaPredicted RBP1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 PRORSD1PA6NEY8 169 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 A8MUN3 132 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 CLDN25C9JDP6 229 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 H3BSA7 217 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 COX7A2LO14548 114 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 GSTZ1O43708 216 aaPredicted RBP1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 ORC5O43913 435 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 PIAS1O75925 651 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 IGKV1D-12P01611 117 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 PPBPP02775 128 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 SMIM17P0DL12 118 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 CNTFRP26992 372 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 GTF2A1P52655 376 aaPredicted RBP1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 TNFAIP6P98066 277 aaPredicted RBP1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 RHEBQ15382 184 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 C12orf74Q32Q52 190 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 C9orf64Q5T6V5 341 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 TMEM78Q5T7P6 136 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 SAMD13Q5VXD3 122 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 AMN1Q8IY45 258 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 EXOC3-AS1Q8N2X6 119 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 GDPD1Q8N9F7 314 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 SLC25A40Q8TBP6 338 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 RAB2BQ8WUD1 216 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 C11orf40Q8WZ69 217 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 ROPN1LQ96C74 230 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 GNPNAT1Q96EK6 184 aaPredicted RBP1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 TSPAN32Q96QS1 320 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 CCL13Q99616 98 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 PBDC1Q9BVG4 233 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 ZNF286AQ9HBT8 521 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 TMEM138Q9NPI0 162 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 PRTFDC1Q9NRG1 225 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 SSR3Q9UNL2 185 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 CYSLTR1Q9Y271 337 aa1.6□□□□□ -2.15
SCAMP1-205ENST00000614488 OTOFQ9HC10 1997 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 TAF1LQ8IZX4 1826 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 DCCP43146 1447 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 NCOA3Q9Y6Q9 1424 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 DSCAML1Q8TD84 2053 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 KIF21AQ7Z4S6 1674 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 IGHV1-69-2A0A0G2JMI3 117 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 A0A0J9YY10 115 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 A0A1B0GX78 115 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 LINC00862A6NCI5 91 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 OR5H14A6NHG9 310 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 LEUTXA8MZ59 168 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 H7C1C5 153 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 LST1O00453 97 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 PIRO00625 290 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 KPNA4O00629 521 aaPredicted RBP1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 ZNF682O95780 498 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 IGLV3-27P01718 113 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 TRGV3P03979 118 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 C8GP07360 202 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 OR10J4P0C629 311 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 SPI1P17947 270 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 LCN6P62502 163 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 GNA12Q03113 381 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 DHRS2Q13268 280 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 GRK1Q15835 563 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 PLPPR5Q32ZL2 321 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 CCDC58Q4VC31 144 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 Q8NAQ8 132 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 OR11G2Q8NGC1 345 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 OR5J2Q8NH18 312 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 SGMS2Q8NHU3 365 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 SKA2Q8WVK7 121 aaPredicted RBP1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 C12orf43Q96C57 262 aaKnown RBP1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 TCEAL4Q96EI5 215 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 DNAJC30Q96LL9 226 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 NMNAT3Q96T66 252 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 EFCAB11Q9BUY7 163 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 SH3BGRL3Q9H299 93 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 C11orf68Q9H3H3 251 aaKnown RBP1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 LRTM1Q9HBL6 345 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 GPR84Q9NQS5 396 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 LYRM2Q9NU23 88 aaPredicted RBP1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 ACER3Q9NUN7 267 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 PLXND1Q9Y4D7 1925 aa1.59□□□□□ -2.15
SCAMP1-205ENST00000614488 DSCAMO60469 2012 aa1.59□□□□□ -2.16
SCAMP1-205ENST00000614488 CEP170Q5SW79 1584 aa1.59□□□□□ -2.16
SCAMP1-205ENST00000614488 CACNA1SQ13698 1873 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 ARAP1Q96P48 1450 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 MRC2Q9UBG0 1479 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 ZNF638Q14966 1978 aaKnown RBP1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 IGHV3-21A0A0B4J1V1 117 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 IGHV3-43A0A0B4J1X8 118 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 A6NED7 52 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 K7ERS5 55 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 M0QZK8 103 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms