RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TRAPPC2P0DI81 140 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 TRAPPC2BP0DI82 140 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 GABARAPL2P60520 117 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 MXD1Q05195 221 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 IDNKQ5T6J7 187 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 UBE2UQ5VVX9 321 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 TMEM17Q86X19 198 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 TMEM217Q8N7C4 229 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 GDPD1Q8N9F7 314 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 TMEM190Q8WZ59 177 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 HINT2Q9BX68 163 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 S1PR2O95136 353 aa13.26□□□□□ -0.29
SMN2-213ENST00000614240 RPL35AP18077 110 aaKnown RBP13.26□□□□□ -0.29
SMN2-213ENST00000614240 SDC2P34741 201 aa13.26□□□□□ -0.29
SMN2-213ENST00000614240 EWSR1Q01844 656 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMN2-213ENST00000614240 POU2AF1Q16633 256 aa13.26□□□□□ -0.29
SMN2-213ENST00000614240 THOC7Q6I9Y2 204 aaKnown RBP13.26□□□□□ -0.29
SMN2-213ENST00000614240 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
SMN2-213ENST00000614240 FCGR1BQ92637 280 aa13.26□□□□□ -0.29
SMN2-213ENST00000614240 BSCL2Q96G97 398 aaPredicted RBP13.26□□□□□ -0.29
SMN2-213ENST00000614240 PLEKHA2Q9HB19 425 aa13.26□□□□□ -0.29
SMN2-213ENST00000614240 DIABLOQ9NR28 239 aa13.26□□□□□ -0.29
SMN2-213ENST00000614240 ETV7Q9Y603 341 aa13.26□□□□□ -0.29
SMN2-213ENST00000614240 IGHV3-21A0A0B4J1V1 117 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 KIR2DL5BA0A0G2JN68 375 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 KIR2DL5BA0A0G2JPC4 375 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 OR4C46A6NHA9 309 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 SERPINE2P07093 398 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 HERV-K104P61576 105 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 SPSB3Q6PJ21 355 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 ZNF773Q6PK81 442 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 ZNF818PQ6ZRF7 136 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 SPARTQ8N0X7 666 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 KIR2DL5AQ8N109 375 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 UBAC2Q8NBM4 344 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 OR1L8Q8NGR8 309 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 OR5H6Q8NGV6 325 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 KIR2DL5BQ8NHK3 375 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 GIMAP1Q8WWP7 306 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 BORCS5Q969J3 196 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 RNF183Q96D59 192 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 C21orf62Q9NYP8 219 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 COMMD9Q9P000 198 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 RAB26Q9ULW5 256 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 DNAH1Q9P2D7 4330 aa13.25□□□□□ -0.29
SMN2-213ENST00000614240 IGHV3OR16-8A0A075B7F1 116 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 TEX50A0A1B0GTY4 177 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 NDUFA4O00483 81 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 ZNF207O43670 478 aaKnown RBP13.24□□□□□ -0.29
SMN2-213ENST00000614240 FGF2P09038 288 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 CLEC2LP0C7M8 214 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 CBX5P45973 191 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 SCAND1P57086 179 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 WT1-ASQ06250 92 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 Q56UQ5 140 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 TSPAN14Q8NG11 270 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 OR5AP2Q8NGF4 316 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 OR5B3Q8NH48 314 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 SLC25A38Q96DW6 304 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 C6orf62Q9GZU0 229 aaPredicted RBP13.24□□□□□ -0.29
SMN2-213ENST00000614240 AUNIPQ9H7T9 357 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 IFT46Q9NQC8 304 aa13.24□□□□□ -0.29
SMN2-213ENST00000614240 A0A0A6YYH2 397 aa13.23□□□□□ -0.29
SMN2-213ENST00000614240 A6NJ64 397 aa13.23□□□□□ -0.29
SMN2-213ENST00000614240 SNAPC5O75971 98 aa13.23□□□□□ -0.29
SMN2-213ENST00000614240 ODF3L2Q3SX64 289 aa13.23□□□□□ -0.29
SMN2-213ENST00000614240 LSM10Q969L4 123 aaKnown RBP13.23□□□□□ -0.29
SMN2-213ENST00000614240 GALNT14Q96FL9 552 aa13.23□□□□□ -0.29
SMN2-213ENST00000614240 LOC100506127A0A0U1RQW1 187 aa13.22□□□□□ -0.29
SMN2-213ENST00000614240 MEIS3P1A6NDR6 274 aa13.22□□□□□ -0.29
SMN2-213ENST00000614240 CTSDP07339 412 aaPredicted RBP13.22□□□□□ -0.29
SMN2-213ENST00000614240 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
SMN2-213ENST00000614240 SCARB1Q8WTV0 552 aa13.22□□□□□ -0.29
SMN2-213ENST00000614240 CHRDL1Q9BU40 450 aa13.22□□□□□ -0.29
SMN2-213ENST00000614240 EHFQ9NZC4 300 aa13.22□□□□□ -0.29
SMN2-213ENST00000614240 OR51B2Q9Y5P1 312 aa13.22□□□□□ -0.29
SMN2-213ENST00000614240 F11RQ9Y624 299 aaKnown RBP13.22□□□□□ -0.29
SMN2-213ENST00000614240 MARCH11A6NNE9 402 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 K7EMT4 169 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 KRASP01116 189 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 RLN1P04808 185 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 GNRHRP30968 328 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 LPAR6P43657 344 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 ATP6V0BQ99437 205 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 RNF167Q9H6Y7 350 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 MAP6D1Q9H9H5 199 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 NDUFA4L2Q9NRX3 87 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 NSG2Q9Y328 171 aa13.21□□□□□ -0.29
SMN2-213ENST00000614240 PGLYRP1O75594 196 aaPredicted RBP13.2□□□□□ -0.3
SMN2-213ENST00000614240 YIF1AO95070 293 aa13.2□□□□□ -0.3
SMN2-213ENST00000614240 F2RP25116 425 aa13.2□□□□□ -0.3
SMN2-213ENST00000614240 TFPI2P48307 235 aa13.2□□□□□ -0.3
SMN2-213ENST00000614240 MFAP2P55001 183 aa13.2□□□□□ -0.3
SMN2-213ENST00000614240 CMC4P56277 68 aaPredicted RBP13.2□□□□□ -0.3
SMN2-213ENST00000614240 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
SMN2-213ENST00000614240 PHLDA1Q8WV24 401 aaPredicted RBP13.2□□□□□ -0.3
SMN2-213ENST00000614240 TMEM56Q96MV1 263 aa13.2□□□□□ -0.3
SMN2-213ENST00000614240 SMPXQ9UHP9 88 aa13.2□□□□□ -0.3
SMN2-213ENST00000614240 C15orf62A8K5M9 175 aa13.19□□□□□ -0.3
SMN2-213ENST00000614240 NUPL2O15504 423 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms