RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 K7EMT4 169 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 TGOLN2O43493 480 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 TRAPPC2P0DI81 140 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 TRAPPC2BP0DI82 140 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 PSMB9P28065 219 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 GPR183P32249 361 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 UNQ9165/PRO28630Q6UXU0 137 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 C19orf35Q6ZS72 473 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 SPARTQ8N0X7 666 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 STPG3Q8N7X2 389 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 GDPD1Q8N9F7 314 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 DMBX1Q8NFW5 382 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 OR5AP2Q8NGF4 316 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 OR1L8Q8NGR8 309 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 KLK5Q9Y337 293 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 SELENOKQ9Y6D0 94 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 S4R3C0 116 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 CXorf65A6NEN9 183 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 SULT1C2O00338 296 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 NDUFA4O00483 81 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 TNFSF12O43508 249 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 REG1AP05451 166 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 SERPINE2P07093 398 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 ERVK-16P61578 105 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 TMEM190Q8WZ59 177 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 C6orf62Q9GZU0 229 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 FKBP11Q9NYL4 201 aa13.27□□□□□ -0.29
SHKBP1-227ENST00000602011 SMIM30A4D0T7 59 aa13.26□□□□□ -0.29
SHKBP1-227ENST00000602011 OR4C46A6NHA9 309 aa13.26□□□□□ -0.29
SHKBP1-227ENST00000602011 SDC2P34741 201 aa13.26□□□□□ -0.29
SHKBP1-227ENST00000602011 SLC25A24Q6NUK1 477 aa13.26□□□□□ -0.29
SHKBP1-227ENST00000602011 CEMP1Q6PRD7 247 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-227ENST00000602011 DHRS11Q6UWP2 260 aa13.26□□□□□ -0.29
SHKBP1-227ENST00000602011 AUNIPQ9H7T9 357 aa13.26□□□□□ -0.29
SHKBP1-227ENST00000602011 TMEM140Q9NV12 185 aa13.26□□□□□ -0.29
SHKBP1-227ENST00000602011 OR13C7P0DN81 318 aa13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 HERV-K104P61576 105 aa13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 AADACL3Q5VUY0 350 aa13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 CROCCP3Q8IVE0 287 aa13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 GVQW1Q8N7I0 195 aa13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 LSM10Q969L4 123 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 RNF183Q96D59 192 aa13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 GALNT14Q96FL9 552 aa13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 GPHA2Q96T91 129 aa13.25□□□□□ -0.29
SHKBP1-227ENST00000602011 A0A0J9YWU9 116 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 TEX50A0A1B0GTY4 177 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 C15orf62A8K5M9 175 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 SNAPC5O75971 98 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 LY6G6CO95867 125 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 F2RP25116 425 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 ZNF773Q6PK81 442 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 ZNF818PQ6ZRF7 136 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 LYG2Q86SG7 212 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 CMTM1Q8IZ96 169 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 TMEM56Q96MV1 263 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 NDUFA4L2Q9NRX3 87 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 C21orf62Q9NYP8 219 aa13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 F11RQ9Y624 299 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-227ENST00000602011 TRAV3A0A0B4J244 114 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 MARCH11A6NNE9 402 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 CD5P06127 495 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 GNRHRP30968 328 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 FXYD4P59646 89 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 IDNKQ5T6J7 187 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 OR5B3Q8NH48 314 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 OR51H1Q8NH63 302 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 S100A16Q96FQ6 103 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 TSC22D3Q99576 134 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 FAM212BQ9NTI7 297 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 KMT2AQ03164 3969 aa13.23□□□□□ -0.29
SHKBP1-227ENST00000602011 HERC2O95714 4834 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 OR2T8A6NH00 312 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 XRCC3O43542 346 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 S1PR2O95136 353 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 RELQ04864 619 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 WT1-ASQ06250 92 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 OR10W1Q8NGF6 305 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 SCARB1Q8WTV0 552 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 SLC25A38Q96DW6 304 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 TXN2Q99757 166 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 IFT46Q9NQC8 304 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 PRNDQ9UKY0 176 aa13.22□□□□□ -0.29
SHKBP1-227ENST00000602011 DNAH10Q8IVF4 4471 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 IGHV3-35A0A0C4DH35 117 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 PGLYRP1O75594 196 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 TNFAIP8O95379 198 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 S100GP29377 79 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 MXD1Q05195 221 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 PMS2P11Q13670 270 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 KCTD21Q4G0X4 260 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 LPCAT3Q6P1A2 487 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 TMEM17Q86X19 198 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 TSPAN14Q8NG11 270 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 OR5H6Q8NGV6 325 aa13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 DGCR14Q96DF8 476 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-227ENST00000602011 PTHLHP12272 177 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 FCGR2BP31994 310 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 TAS2R46P59540 309 aa13.2□□□□□ -0.3
SHKBP1-227ENST00000602011 DEFB135Q30KP9 77 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms