RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 NDPQ00604 133 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 C11orf87Q6NUJ2 197 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HSD17B13Q7Z5P4 300 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 THAP6Q8TBB0 222 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 DTD1Q8TEA8 209 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 WSB1Q9Y6I7 421 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 A0A1B0GW64 132 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CGB1A6NKQ9 187 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 E5RGE8 158 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 KCNAB3O43448 404 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CNIH1O95406 144 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 VDAC2P45880 294 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 TAS2R30P59541 319 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 FXYD3Q14802 87 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 Q5BKY6 102 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 JMJD8Q96S16 334 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HSPB9Q9BQS6 159 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ENY2Q9NPA8 101 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 OR5AC2Q9NZP5 309 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 FN1P02751 2386 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 PLXNB1O43157 2135 aa13.24□□□□□ -0.29
CDK5RAP3-215ENST00000579780 TEX22C9J3V5 150 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 E7EUB6 86 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 L7N2F9 121 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 GPR137BO60478 399 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 TSC22D2O75157 780 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 OPN1MWP04001 364 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 IAPPP10997 89 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 RPL15P61313 204 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 VAMP2P63027 116 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ZFP69Q49AA0 526 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SPINK9Q5DT21 86 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 GRPEL2Q8TAA5 225 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 PPP1R14BQ96C90 147 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SMIM8Q96KF7 97 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HINT2Q9BX68 163 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 NPFFR1Q9GZQ6 430 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ESM1Q9NQ30 184 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ZNF580Q9UK33 172 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 MAST4O15021 2626 aa13.23□□□□□ -0.29
CDK5RAP3-215ENST00000579780 FXYD6-FXYD2A0A087WZ82 144 aa13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 IGLC7A0M8Q6 106 aa13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 IGHG2P01859 326 aa13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 RNASE1P07998 156 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 P2RY1P47900 373 aa13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 DCUN1D4Q92564 292 aa13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HYLS1Q96M11 299 aa13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 RNF126Q9BV68 326 aa13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HIPK2Q9H2X6 1198 aa13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 LYRM2Q9NU23 88 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ZFHX3Q15911 3703 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SH2D7A6NKC9 451 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ATP6V0E1O15342 81 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 TMEM50AO95807 157 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 PAX9P55771 341 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 RPL23AP62750 156 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 TMEM65Q6PI78 240 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SLC35E3Q7Z769 313 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 OR2C3Q8N628 320 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ZNF114Q8NC26 417 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SLC24A4Q8NFF2 622 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ABHD5Q8WTS1 349 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 TMEM68Q96MH6 324 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HEYLQ9NQ87 328 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 PARP11Q9NR21 331 aa13.21□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HMSDA8MTL9 139 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 HTR2BP41595 481 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ATP5IP56385 69 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 RPP30P78346 268 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ERHP84090 104 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 WT1-ASQ06250 92 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 BSXQ3C1V8 233 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 C9orf152Q5JTZ5 239 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 OR10W1Q8NGF6 305 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 DUX5Q96PT3 197 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 FAM103A1Q9BTL3 118 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 PSENENQ9NZ42 101 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TNFSF18Q9UNG2 199 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 FBXO7Q9Y3I1 522 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 U3KQ87 197 aa13.2□□□□□ -0.3
CDK5RAP3-215ENST00000579780 MSGN1A6NI15 193 aa13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 H3BP45 60 aa13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TRIM77I1YAP6 450 aa13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 SCAF4O95104 1147 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 IGF1P05019 195 aa13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 BLCAPP62952 87 aa13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 UBA52P62987 128 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 NOXA1Q86UR1 476 aa13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 AQP10Q96PS8 301 aa13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
CDK5RAP3-215ENST00000579780 RNF222A6NCQ9 220 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 NPIPB5A8MRT5 1133 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 AP4M1O00189 453 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TCF21O43680 179 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms