RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 S100A2P29034 98 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 NDUFA6P56556 154 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 DIAPH2-AS1Q14236 149 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 NRGNQ92686 78 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 TMEM133Q9H2Q1 129 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 ELOA3CA0A087WX78 387 aaPredicted RBP16.47■□□□□ 0.23
SMG8-203ENST00000578922 GOSR1O95249 250 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 MBP02144 154 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 OPN1MWP04001 364 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 OPN1MW2P0DN77 364 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 OPN1MW3P0DN78 364 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 H2BFWTQ7Z2G1 175 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 FAM210BQ96KR6 192 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 GGACTQ9BVM4 153 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 BPESC1Q9GZL8 116 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 RBKSQ9H477 322 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 SLC39A9Q9NUM3 307 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 GAR1Q9NY12 217 aaKnown RBP16.47■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BKO60814 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 YIF1AO95070 293 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HPRT1P00492 218 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BJP06899 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 CT45A6P0DMU7 189 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 CT45A5P0DMU8 189 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 CT45A7P0DMV0 189 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 COX6B1P14854 86 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BOP23527 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BBP33778 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 THBS3P49746 956 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BDP58876 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BCP62807 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST2H2BEQ16778 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BHQ93079 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BNQ99877 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 HIST1H2BMQ99879 126 aa16.46■□□□□ 0.23
SMG8-203ENST00000578922 MRPL20Q9BYC9 149 aaKnown RBP16.46■□□□□ 0.23
SMG8-203ENST00000578922 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.46■□□□□ 0.23
SMG8-203ENST00000578922 TRBV24-1A0A075B6N3 115 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 LOC105371242A0A075B767 164 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 RBMXL2O75526 392 aaKnown RBP16.45■□□□□ 0.22
SMG8-203ENST00000578922 COX7A1P24310 79 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 FGF8P55075 233 aaPredicted RBP16.45■□□□□ 0.22
SMG8-203ENST00000578922 ARF6P62330 175 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 SSX7Q7RTT5 188 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 CENPEQ02224 2701 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 UBE2L5PA0A1B0GUS4 154 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 CEBPZOSA8MTT3 80 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 LIPFP07098 398 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 OR9G1Q8NH87 305 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 C8orf46Q8TAG6 207 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 IGFBPL1Q8WX77 278 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 LHX4Q969G2 390 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 CIB3Q96Q77 187 aaPredicted RBP16.45■□□□□ 0.22
SMG8-203ENST00000578922 TMEM147Q9BVK8 224 aa16.45■□□□□ 0.22
SMG8-203ENST00000578922 COL8A1P27658 744 aa16.44■□□□□ 0.22
SMG8-203ENST00000578922 ZNF833PQ6ZTB9 187 aa16.44■□□□□ 0.22
SMG8-203ENST00000578922 LY6G5BQ8NDX9 201 aa16.44■□□□□ 0.22
SMG8-203ENST00000578922 OR4S2Q8NH73 311 aa16.44■□□□□ 0.22
SMG8-203ENST00000578922 NAT8Q9UHE5 227 aa16.44■□□□□ 0.22
SMG8-203ENST00000578922 IGHV2-26A0A0B4J1V2 119 aa16.44■□□□□ 0.22
SMG8-203ENST00000578922 ZFP36P26651 326 aaKnown RBP16.44■□□□□ 0.22
SMG8-203ENST00000578922 DMRT1Q9Y5R6 373 aa16.44■□□□□ 0.22
SMG8-203ENST00000578922 A0A087X0M5 115 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 A0A1B0GX30 115 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 IFITM10A6NMD0 228 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 TMEM250H0YL14 139 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 TRGC2P03986 189 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 OR9G9P0C7N8 305 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 KIR2DS2P43631 304 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 ELLP55199 621 aaPredicted RBP16.43■□□□□ 0.22
SMG8-203ENST00000578922 MEF2BQ02080 365 aaPredicted RBP16.43■□□□□ 0.22
SMG8-203ENST00000578922 SPINK9Q5DT21 86 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 LURAP1LQ8IV03 231 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 RPP25LQ8N5L8 163 aaKnown RBP16.43■□□□□ 0.22
SMG8-203ENST00000578922 ADTRPQ96IZ2 230 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 VPS13CQ709C8 3753 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 CTXND1A0A1B0GTU2 59 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 PPP1R2P9O14990 202 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 RBFOX2O43251 390 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMG8-203ENST00000578922 IGKV1-16P04430 117 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 LCN2P80188 198 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 OR8G2PQ6IF36 304 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 CYP2G1PQ6ZSU1 146 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 SLC35D1Q9NTN3 355 aa16.43■□□□□ 0.22
SMG8-203ENST00000578922 ERVK-16P61578 105 aa16.42■□□□□ 0.22
SMG8-203ENST00000578922 PSMB3P49720 205 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 DNLZQ5SXM8 178 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 LINC00311Q8N616 119 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 Q8N7P7 452 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 OR10P1Q8NGE3 313 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 MANBALQ9NQG1 85 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 TRAV3A0A0B4J244 114 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 LY86O95711 162 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 PDLIM4P50479 330 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 CD81P60033 236 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 TMEM241Q24JQ0 296 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 PNKDQ8N490 385 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 ZNF596Q8TC21 504 aa16.41■□□□□ 0.22
SMG8-203ENST00000578922 CLEC7AQ9BXN2 247 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms