RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 TRAPPC2P0DI81 140 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 TRAPPC2BP0DI82 140 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 LPAR6P43657 344 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
LITAF-211ENST00000572255 THOC7Q6I9Y2 204 aaKnown RBP13.03□□□□□ -0.32
LITAF-211ENST00000572255 TMEM61Q8N0U2 210 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 GDPD1Q8N9F7 314 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 UXS1Q8NBZ7 420 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 HIPK2Q9H2X6 1198 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 SRD5A3Q9H8P0 318 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 THYN1Q9P016 225 aa13.03□□□□□ -0.32
LITAF-211ENST00000572255 RYR2Q92736 4967 aa13.02□□□□□ -0.32
LITAF-211ENST00000572255 EIF4EP06730 217 aaKnown RBP13.02□□□□□ -0.33
LITAF-211ENST00000572255 OR13C7P0DN81 318 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 PTBP1P26599 531 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■■□ 22.8
LITAF-211ENST00000572255 WT1-ASQ06250 92 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 TM4SF20Q53R12 229 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 UNQ9165/PRO28630Q6UXU0 137 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 HSD17B13Q7Z5P4 300 aaPredicted RBP13.02□□□□□ -0.33
LITAF-211ENST00000572255 LYSMD2Q8IV50 215 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 CMTM1Q8IZ96 169 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 OR1L8Q8NGR8 309 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 OR6F1Q8NGZ6 308 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 FCAMRQ8WWV6 532 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 DGCR14Q96DF8 476 aaKnown RBP13.02□□□□□ -0.33
LITAF-211ENST00000572255 GAR1Q9NY12 217 aaKnown RBP13.02□□□□□ -0.33
LITAF-211ENST00000572255 COMMD3Q9UBI1 195 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 STARD9Q9P2P6 4700 aa13.02□□□□□ -0.33
LITAF-211ENST00000572255 GPR31O00270 319 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 CYB5BO43169 146 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 KRASP01116 189 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 SERPINE2P07093 398 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 HLA-DMAP28067 261 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 HRH1P35367 487 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 ZNF585BQ52M93 769 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 PLET1Q6UQ28 207 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 BTNL8Q6UX41 500 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 SLC16A13Q7RTY0 426 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 VN1R17PQ8TDU5 208 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 GPX8Q8TED1 209 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 FAM110AQ9BQ89 295 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 HINT2Q9BX68 163 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 NDUFA4L2Q9NRX3 87 aa13.01□□□□□ -0.33
LITAF-211ENST00000572255 IGHV3-35A0A0C4DH35 117 aa13□□□□□ -0.33
LITAF-211ENST00000572255 LCE6AA0A183 80 aa13□□□□□ -0.33
LITAF-211ENST00000572255 TGOLN2O43493 480 aa13□□□□□ -0.33
LITAF-211ENST00000572255 SNAPC5O75971 98 aa13□□□□□ -0.33
LITAF-211ENST00000572255 SCAF4O95104 1147 aaKnown RBP13□□□□□ -0.33
LITAF-211ENST00000572255 APOA1P02647 267 aa13□□□□□ -0.33
LITAF-211ENST00000572255 G6PCP35575 357 aa13□□□□□ -0.33
LITAF-211ENST00000572255 NCS1P62166 190 aa13□□□□□ -0.33
LITAF-211ENST00000572255 SLC25A24Q6NUK1 477 aa13□□□□□ -0.33
LITAF-211ENST00000572255 CADM3Q8N126 398 aa13□□□□□ -0.33
LITAF-211ENST00000572255 MARC2Q969Z3 335 aa13□□□□□ -0.33
LITAF-211ENST00000572255 FUNDC2Q9BWH2 189 aa13□□□□□ -0.33
LITAF-211ENST00000572255 NSG2Q9Y328 171 aa13□□□□□ -0.33
LITAF-211ENST00000572255 OR51B2Q9Y5P1 312 aa13□□□□□ -0.33
LITAF-211ENST00000572255 SACSQ9NZJ4 4579 aa13□□□□□ -0.33
LITAF-211ENST00000572255 SMIM31A0A1B0GVY4 71 aa12.99□□□□□ -0.33
LITAF-211ENST00000572255 C8orf88P0DMB2 117 aa12.99□□□□□ -0.33
LITAF-211ENST00000572255 ELLP55199 621 aaPredicted RBP12.99□□□□□ -0.33
LITAF-211ENST00000572255 VBP1P61758 197 aa12.99□□□□□ -0.33
LITAF-211ENST00000572255 PHLDA2Q53GA4 152 aa12.99□□□□□ -0.33
LITAF-211ENST00000572255 OR52B4Q8NGK2 314 aa12.99□□□□□ -0.33
LITAF-211ENST00000572255 LSM10Q969L4 123 aaKnown RBP12.99□□□□□ -0.33
LITAF-211ENST00000572255 CMTM3Q96MX0 182 aa12.99□□□□□ -0.33
LITAF-211ENST00000572255 ZNF436Q9C0F3 470 aaPredicted RBP12.99□□□□□ -0.33
LITAF-211ENST00000572255 SCPEP1Q9HB40 452 aa12.99□□□□□ -0.33
LITAF-211ENST00000572255 UFC1Q9Y3C8 167 aa12.99□□□□□ -0.33
LITAF-211ENST00000572255 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
LITAF-211ENST00000572255 OR2T8A6NH00 312 aa12.98□□□□□ -0.33
LITAF-211ENST00000572255 MFAP2P55001 183 aa12.98□□□□□ -0.33
LITAF-211ENST00000572255 TSPAN5P62079 268 aa12.98□□□□□ -0.33
LITAF-211ENST00000572255 SNX29P2Q8IUI4 249 aa12.98□□□□□ -0.33
LITAF-211ENST00000572255 MRPL27Q9P0M9 148 aaKnown RBP12.98□□□□□ -0.33
LITAF-211ENST00000572255 PRNDQ9UKY0 176 aa12.98□□□□□ -0.33
LITAF-211ENST00000572255 TRAV25A0A0B4J276 109 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 ELK1P19419 428 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 S100GP29377 79 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 RCVRNP35243 200 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 ANKRD55Q3KP44 614 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 LPCAT3Q6P1A2 487 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 BSCL2Q96G97 398 aaPredicted RBP12.97□□□□□ -0.33
LITAF-211ENST00000572255 LYSTQ99698 3801 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 TMEM14BQ9NUH8 114 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 FKBP11Q9NYL4 201 aa12.97□□□□□ -0.33
LITAF-211ENST00000572255 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 DBX1A6NMT0 343 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 HPGDSO60760 199 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 SPSB3Q6PJ21 355 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 RBPMS2Q6ZRY4 209 aaKnown RBP12.96□□□□□ -0.33
LITAF-211ENST00000572255 TBC1D26Q86UD7 250 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 OR5B3Q8NH48 314 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 TMEM56Q96MV1 263 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 ATP6V0BQ99437 205 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 TSC22D3Q99576 134 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 FAM212BQ9NTI7 297 aaPredicted RBP12.96□□□□□ -0.33
LITAF-211ENST00000572255 C21orf62Q9NYP8 219 aa12.96□□□□□ -0.33
LITAF-211ENST00000572255 C15orf61A6NNL5 157 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms