RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ZDHHC16Q969W1 377 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 SSX3Q99909 188 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 SRSF8Q9BRL6 282 aaKnown RBP6.88□□□□□ -1.31
TRAF3-209ENST00000560463 FBXL15Q9H469 300 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 PLEKHA3Q9HB20 300 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 IGSF23A1L1A6 192 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 NCBP2LA6PVI3 153 aaKnown RBP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 FGF16O43320 207 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 KCNAB3O43448 404 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 JTBO76095 146 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 IFNA10P01566 189 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 CD24P25063 80 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 PAX6P26367 422 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 HTR2BP41595 481 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 RPL27AP46776 148 aaKnown RBP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 COMPP49747 757 aaPredicted RBP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 SUB1P53999 127 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 UBA52P62987 128 aaKnown RBP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 ERHP84090 104 aaKnown RBP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 HNF4GQ14541 408 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 TNXAQ16473 311 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 ATP6V1FQ16864 119 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 ZNF562Q6V9R5 426 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 C16orf82Q7Z2V1 217 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 OR1S2Q8NGQ3 325 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 STOML3Q8TAV4 291 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 HINT2Q9BX68 163 aa6.87□□□□□ -1.31
TRAF3-209ENST00000560463 ZNF471Q9BX82 626 aaPredicted RBP6.87□□□□□ -1.31
TRAF3-209ENST00000560463 NOTCH2Q04721 2471 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 BORCS7-ASMTA0A0B4J1R7 106 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 H3BP45 60 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 DFFBO76075 338 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 CST7O76096 145 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 IFNA7P01567 189 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 HLA-DRB1P01911 266 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 OR8U8P0C7N1 319 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 METTL15P1P0C7V9 234 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 SNCAP37840 140 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 PJVKQ0ZLH3 352 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 ZNF266Q14584 549 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 BSXQ3C1V8 233 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 C2orf83Q53S99 150 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 SPINK9Q5DT21 86 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 FAM120AOSQ5T036 256 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 TEX261Q6UWH6 196 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 ZNF767PQ75MW2 155 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 UBAC2Q8NBM4 344 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 OR10P1Q8NGE3 313 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 OR5C1Q8NGR4 320 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 OR5R1Q8NH85 324 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 PIFOQ8TCI5 191 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 SRSF12Q8WXF0 261 aaKnown RBP6.86□□□□□ -1.31
TRAF3-209ENST00000560463 RBMXL1Q96E39 390 aaKnown RBP6.86□□□□□ -1.31
TRAF3-209ENST00000560463 RBM14Q96PK6 669 aaKnown RBP6.86□□□□□ -1.31
TRAF3-209ENST00000560463 RASL11BQ9BPW5 248 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 SLC25A33Q9BSK2 321 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 GGACTQ9BVM4 153 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 TPSG1Q9NRR2 321 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 TMEM160Q9NX00 188 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 FBXL17Q9UF56 701 aa6.86□□□□□ -1.31
TRAF3-209ENST00000560463 SONP18583 2426 aaKnown RBP6.86□□□□□ -1.31
TRAF3-209ENST00000560463 CGB1A6NKQ9 187 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 C15orf62A8K5M9 175 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 PMS2P5A8MQ11 134 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 H3BUX3 64 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 M0QZK8 103 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 FCN1O00602 326 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 RGS13O14921 159 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 TSPAN9O75954 239 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 CNIH1O95406 144 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 CA2P00918 260 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 OPN1MWP04001 364 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 OPN1MW2P0DN77 364 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 OPN1MW3P0DN78 364 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 TPT1P13693 172 aaKnown RBP6.85□□□□□ -1.31
TRAF3-209ENST00000560463 MYOD1P15172 320 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 NPY1RP25929 384 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 IFITM2Q01629 132 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 SLC38A11Q08AI6 406 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 TMEM267Q0VDI3 215 aaPredicted RBP6.85□□□□□ -1.31
TRAF3-209ENST00000560463 BAP18Q8IXM2 172 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 Q8N9W7 124 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 ZNF114Q8NC26 417 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 SLC24A4Q8NFF2 622 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 ST8SIA2Q92186 375 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 PHYHIPLQ96FC7 376 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 OR4C12Q96R67 309 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 ATP5SQ99766 215 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 PARD6GQ9BYG4 376 aaPredicted RBP6.85□□□□□ -1.31
TRAF3-209ENST00000560463 PRDM13Q9H4Q3 707 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 CYTL1Q9NRR1 136 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 MOB4Q9Y3A3 225 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 FLNBO75369 2602 aaKnown RBP6.85□□□□□ -1.31
TRAF3-209ENST00000560463 OTOGQ6ZRI0 2925 aa6.85□□□□□ -1.31
TRAF3-209ENST00000560463 IGLC7A0M8Q6 106 aa6.84□□□□□ -1.31
TRAF3-209ENST00000560463 A6NDX4 124 aa6.84□□□□□ -1.31
TRAF3-209ENST00000560463 E7EUB6 86 aa6.84□□□□□ -1.31
TRAF3-209ENST00000560463 FNDC10F2Z333 226 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms