RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 F2RP25116 425 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 RPS19P39019 145 aaKnown RBP10.65□□□□□ -0.7
SNX6-210ENST00000557341 RFX2P48378 723 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 LSM3P62310 102 aaKnown RBP10.65□□□□□ -0.7
SNX6-210ENST00000557341 DHRS11Q6UWP2 260 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 BTNL8Q6UX41 500 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 CMTM1Q8IZ96 169 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 UXS1Q8NBZ7 420 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 OR10W1Q8NGF6 305 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 OR52B4Q8NGK2 314 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 MARC2Q969Z3 335 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 YIPF6Q96EC8 236 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 FXYD6Q9H0Q3 95 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 SELENOKQ9Y6D0 94 aa10.65□□□□□ -0.7
SNX6-210ENST00000557341 A0A087WXM4 84 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 PGLYRP1O75594 196 aaPredicted RBP10.64□□□□□ -0.71
SNX6-210ENST00000557341 TNFAIP8O95379 198 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 TRAPPC2P0DI81 140 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 TRAPPC2BP0DI82 140 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 NAT1P18440 290 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 PTBP1P26599 531 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNX6-210ENST00000557341 PRSS3P35030 304 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 ANKRD55Q3KP44 614 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 PLET1Q6UQ28 207 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 UNQ9165/PRO28630Q6UXU0 137 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 TSPAN14Q8NG11 270 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 OR1L8Q8NGR8 309 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 VN1R17PQ8TDU5 208 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 LSM10Q969L4 123 aaKnown RBP10.64□□□□□ -0.71
SNX6-210ENST00000557341 GAR1Q9NY12 217 aaKnown RBP10.64□□□□□ -0.71
SNX6-210ENST00000557341 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
SNX6-210ENST00000557341 GPR31O00270 319 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 TGOLN2O43493 480 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 SCAF4O95104 1147 aaKnown RBP10.63□□□□□ -0.71
SNX6-210ENST00000557341 SERPINE2P07093 398 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 OR13C7P0DN81 318 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 HRH1P35367 487 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 ELLP55199 621 aaPredicted RBP10.63□□□□□ -0.71
SNX6-210ENST00000557341 WT1-ASQ06250 92 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 TM4SF20Q53R12 229 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 OR6F1Q8NGZ6 308 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 IL17DQ8TAD2 202 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 FCAMRQ8WWV6 532 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 SLC25A46Q96AG3 418 aa10.63□□□□□ -0.71
SNX6-210ENST00000557341 DGCR14Q96DF8 476 aaKnown RBP10.63□□□□□ -0.71
SNX6-210ENST00000557341 MRPL27Q9P0M9 148 aaKnown RBP10.63□□□□□ -0.71
SNX6-210ENST00000557341 TRAV25A0A0B4J276 109 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 IGHV3-35A0A0C4DH35 117 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 TEX50A0A1B0GTY4 177 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 SNAPC5O75971 98 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 KRASP01116 189 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 EIF4EP06730 217 aaKnown RBP10.62□□□□□ -0.71
SNX6-210ENST00000557341 S100GP29377 79 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 G6PCP35575 357 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 ZNF585BQ52M93 769 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 RBPMS2Q6ZRY4 209 aaKnown RBP10.62□□□□□ -0.71
SNX6-210ENST00000557341 CADM3Q8N126 398 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 BSCL2Q96G97 398 aaPredicted RBP10.62□□□□□ -0.71
SNX6-210ENST00000557341 HINT2Q9BX68 163 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 ZNF436Q9C0F3 470 aaPredicted RBP10.62□□□□□ -0.71
SNX6-210ENST00000557341 NDUFA4L2Q9NRX3 87 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 OR51B2Q9Y5P1 312 aa10.62□□□□□ -0.71
SNX6-210ENST00000557341 F11RQ9Y624 299 aaKnown RBP10.62□□□□□ -0.71
SNX6-210ENST00000557341 OR2T8A6NH00 312 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 APOA1P02647 267 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 C8orf88P0DMB2 117 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 HLA-DMAP28067 261 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 LPAR6P43657 344 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 TSPAN5P62079 268 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 SLC25A24Q6NUK1 477 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 SPSB3Q6PJ21 355 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 OR1L6Q8NGR2 347 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 OR5B3Q8NH48 314 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 GPX8Q8TED1 209 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 TMEM56Q96MV1 263 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 ATP6V0BQ99437 205 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 TSC22D3Q99576 134 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 GGTLC1Q9BX51 225 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 DAZ1Q9NQZ3 744 aaKnown RBP10.61□□□□□ -0.71
SNX6-210ENST00000557341 FKBP11Q9NYL4 201 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 COMMD3Q9UBI1 195 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 PRNDQ9UKY0 176 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 NSG2Q9Y328 171 aa10.61□□□□□ -0.71
SNX6-210ENST00000557341 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 SMIM31A0A1B0GVY4 71 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 C15orf61A6NNL5 157 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 NCS1P62166 190 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 PHLDA2Q53GA4 152 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 LPCAT3Q6P1A2 487 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 CMTM3Q96MX0 182 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 SPAG8Q99932 426 aaPredicted RBP10.6□□□□□ -0.71
SNX6-210ENST00000557341 SCPEP1Q9HB40 452 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 FAM212BQ9NTI7 297 aaPredicted RBP10.6□□□□□ -0.71
SNX6-210ENST00000557341 C21orf62Q9NYP8 219 aa10.6□□□□□ -0.71
SNX6-210ENST00000557341 LOC102724200A0A096LPH7 203 aaPredicted RBP10.59□□□□□ -0.71
SNX6-210ENST00000557341 NDUFA4O00483 81 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 RCVRNP35243 200 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 MFAP2P55001 183 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 SNX29P2Q8IUI4 249 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms