RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TEX50A0A1B0GTY4 177 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 SCAF4O95104 1147 aaKnown RBP16.95■□□□□ 0.3
ACTN1-220ENST00000556433 FGF2P09038 288 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 OR13C7P0DN81 318 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 TAS2R20P59543 309 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 ERVK-16P61578 105 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 LSM3P62310 102 aaKnown RBP16.95■□□□□ 0.3
ACTN1-220ENST00000556433 ZNF585BQ52M93 769 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 BTNL8Q6UX41 500 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 OR5H2Q8NGV7 314 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 IL17DQ8TAD2 202 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 MOB3AQ96BX8 217 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 CSMD3Q7Z407 3707 aa16.95■□□□□ 0.3
ACTN1-220ENST00000556433 CYB5BO43169 146 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 RLN1P04808 185 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 F2RP25116 425 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 LPAR6P43657 344 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 ANKRD55Q3KP44 614 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 THOC7Q6I9Y2 204 aaKnown RBP16.94■□□□□ 0.3
ACTN1-220ENST00000556433 SLC25A24Q6NUK1 477 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 OR1L8Q8NGR8 309 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 MARC2Q969Z3 335 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 MRPL27Q9P0M9 148 aaKnown RBP16.94■□□□□ 0.3
ACTN1-220ENST00000556433 ANAPC10Q9UM13 185 aa16.94■□□□□ 0.3
ACTN1-220ENST00000556433 SERPINE2P07093 398 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 C8orf88P0DMB2 117 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 NAT1P18440 290 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 PRSS3P35030 304 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 TAS2R46P59540 309 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 WT1-ASQ06250 92 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 RBPMS2Q6ZRY4 209 aaKnown RBP16.93■□□□□ 0.3
ACTN1-220ENST00000556433 HSD17B13Q7Z5P4 300 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-220ENST00000556433 GDPD1Q8N9F7 314 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 VN1R17PQ8TDU5 208 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 YIPF6Q96EC8 236 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 HINT2Q9BX68 163 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 UFC1Q9Y3C8 167 aa16.93■□□□□ 0.3
ACTN1-220ENST00000556433 MARCH11A6NNE9 402 aa16.92■□□□□ 0.3
ACTN1-220ENST00000556433 KRASP01116 189 aa16.92■□□□□ 0.3
ACTN1-220ENST00000556433 ELLP55199 621 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-220ENST00000556433 CMTM1Q8IZ96 169 aa16.92■□□□□ 0.3
ACTN1-220ENST00000556433 OR6F1Q8NGZ6 308 aa16.92■□□□□ 0.3
ACTN1-220ENST00000556433 FCAMRQ8WWV6 532 aa16.92■□□□□ 0.3
ACTN1-220ENST00000556433 DGCR14Q96DF8 476 aaKnown RBP16.92■□□□□ 0.3
ACTN1-220ENST00000556433 NSG2Q9Y328 171 aa16.92■□□□□ 0.3
ACTN1-220ENST00000556433 TRAV25A0A0B4J276 109 aa16.91■□□□□ 0.3
ACTN1-220ENST00000556433 TGOLN2O43493 480 aa16.91■□□□□ 0.3
ACTN1-220ENST00000556433 SNAPC5O75971 98 aa16.91■□□□□ 0.3
ACTN1-220ENST00000556433 TSPAN14Q8NG11 270 aa16.91■□□□□ 0.3
ACTN1-220ENST00000556433 ZNF436Q9C0F3 470 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-220ENST00000556433 VCX3AQ9NNX9 186 aa16.91■□□□□ 0.3
ACTN1-220ENST00000556433 NDUFA4L2Q9NRX3 87 aa16.91■□□□□ 0.3
ACTN1-220ENST00000556433 OR51B2Q9Y5P1 312 aa16.91■□□□□ 0.3
ACTN1-220ENST00000556433 LYSTQ99698 3801 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 A0A087WXM4 84 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 OR2T8A6NH00 312 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 GPR31O00270 319 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 HLA-DMAP28067 261 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 G6PCP35575 357 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 LYSMD2Q8IV50 215 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 OR1L6Q8NGR2 347 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 LSM10Q969L4 123 aaKnown RBP16.9■□□□□ 0.3
ACTN1-220ENST00000556433 GGTLC1Q9BX51 225 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 DNAH1Q9P2D7 4330 aa16.9■□□□□ 0.3
ACTN1-220ENST00000556433 LOC102724200A0A096LPH7 203 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-220ENST00000556433 IGHV3-21A0A0B4J1V1 117 aa16.89■□□□□ 0.29
ACTN1-220ENST00000556433 HRH1P35367 487 aa16.89■□□□□ 0.29
ACTN1-220ENST00000556433 CADM3Q8N126 398 aa16.89■□□□□ 0.29
ACTN1-220ENST00000556433 FXYD6Q9H0Q3 95 aa16.89■□□□□ 0.29
ACTN1-220ENST00000556433 F11RQ9Y624 299 aaKnown RBP16.89■□□□□ 0.29
ACTN1-220ENST00000556433 MFAP2P55001 183 aa16.88■□□□□ 0.29
ACTN1-220ENST00000556433 OR2C3Q8N628 320 aa16.88■□□□□ 0.29
ACTN1-220ENST00000556433 TMEM190Q8WZ59 177 aa16.88■□□□□ 0.29
ACTN1-220ENST00000556433 BSCL2Q96G97 398 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-220ENST00000556433 C5orf66Q9H5L9 145 aa16.88■□□□□ 0.29
ACTN1-220ENST00000556433 EIF4EP06730 217 aaKnown RBP16.87■□□□□ 0.29
ACTN1-220ENST00000556433 TSPAN5P62079 268 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 PHLDA2Q53GA4 152 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 SLC38A6Q8IZM9 456 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 GPX8Q8TED1 209 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 SCARB1Q8WTV0 552 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 SLC25A46Q96AG3 418 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 FKBP11Q9NYL4 201 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 C21orf62Q9NYP8 219 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 COMMD3Q9UBI1 195 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 PRNDQ9UKY0 176 aa16.87■□□□□ 0.29
ACTN1-220ENST00000556433 SMIM31A0A1B0GVY4 71 aa16.86■□□□□ 0.29
ACTN1-220ENST00000556433 JTBO76095 146 aa16.86■□□□□ 0.29
ACTN1-220ENST00000556433 LPCAT3Q6P1A2 487 aa16.86■□□□□ 0.29
ACTN1-220ENST00000556433 SPSB3Q6PJ21 355 aa16.86■□□□□ 0.29
ACTN1-220ENST00000556433 TMEM56Q96MV1 263 aa16.86■□□□□ 0.29
ACTN1-220ENST00000556433 CHRDL1Q9BU40 450 aa16.86■□□□□ 0.29
ACTN1-220ENST00000556433 DAZ1Q9NQZ3 744 aaKnown RBP16.86■□□□□ 0.29
ACTN1-220ENST00000556433 NDUFA4O00483 81 aa16.85■□□□□ 0.29
ACTN1-220ENST00000556433 S100GP29377 79 aa16.85■□□□□ 0.29
ACTN1-220ENST00000556433 UBAC2Q8NBM4 344 aa16.85■□□□□ 0.29
ACTN1-220ENST00000556433 OR5B3Q8NH48 314 aa16.85■□□□□ 0.29
ACTN1-220ENST00000556433 ATP6V0BQ99437 205 aa16.85■□□□□ 0.29
ACTN1-220ENST00000556433 TSC22D3Q99576 134 aa16.85■□□□□ 0.29
ACTN1-220ENST00000556433 SPAG8Q99932 426 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms