RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 C9orf16Q9BUW7 83 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 YIPF3Q9GZM5 350 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 SLC22A4Q9H015 551 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 HRASLSQ9HDD0 168 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 FGFR1OP2Q9NVK5 253 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 MED9Q9NWA0 146 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 ARL2BPQ9Y2Y0 163 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 V9GYY5 206 aaPredicted RBP0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 ROCK2O75116 1388 aaKnown RBP0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 MTUS2Q5JR59 1369 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 MAP3K5Q99683 1374 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 CCDC88AQ3V6T2 1871 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 C9orf84Q5VXU9 1444 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 SMG6Q86US8 1419 aaKnown RBP0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 PEG3Q9GZU2 1588 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 SCAF11Q99590 1463 aaKnown RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 RTL1A6NKG5 1358 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ANKRD30AQ9BXX3 1397 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 KIF15Q9NS87 1388 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 A0A1B0GV72 72 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 GNG14A0A1W2PPG7 69 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TRAPPC13A5PLN9 417 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 IQCF5A8MTL0 148 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TMEM114B3SHH9 223 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TSTD3H0UI37 97 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TRAPPC2LH3BP13 241 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 KCNK1O00180 336 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 KPNA3O00505 521 aaPredicted RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ITGB1BP1O14713 200 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ACOX3O15254 700 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TPST1O60507 370 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 SCN2BO60939 215 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 NOS1APO75052 506 aaPredicted RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 DCTN3O75935 186 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 OR2B3O76000 313 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 LYPLA2O95372 231 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 NSA2O95478 260 aaKnown RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 KRT75O95678 551 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 MYL12AP19105 171 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ALDH3A1P30838 453 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 HOXA6P31267 233 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 CDKN2CP42773 168 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 SERPINB9P50453 376 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 B2MP61769 119 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 RPS24P62847 133 aaKnown RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 RPL30P62888 115 aaKnown RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 FKBP1AP62942 108 aaKnown RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ITGB3BPQ13352 177 aaPredicted RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TSNQ15631 228 aaKnown RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ALX1Q15699 326 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 GUK1Q16774 197 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ACSM3Q53FZ2 586 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 C9orf64Q5T6V5 341 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 SDHAF4Q5VUM1 108 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TRIQKQ629K1 86 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TBC1D19Q8N5T2 526 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ZNF565Q8N9K5 539 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 OR5B17Q8NGF7 314 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 CDC26Q8NHZ8 85 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 SKA2Q8WVK7 121 aaPredicted RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 C1orf54Q8WWF1 131 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 RASSF5Q8WWW0 418 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ACOT12Q8WYK0 555 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TESCQ96BS2 214 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 CMTM5Q96DZ9 223 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 GNPNAT1Q96EK6 184 aaPredicted RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 PHB2Q99623 299 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TCEAL7Q9BRU2 100 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 KIFC1Q9BW19 673 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 TRIM4Q9C037 500 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 DERL2Q9GZP9 239 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 CXorf21Q9HAI6 301 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 C19orf12Q9NSK7 152 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 PAQR5Q9NXK6 330 aaPredicted RBP0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 SLC22A13Q9Y226 551 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 ARL5AQ9Y689 179 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 NUP160Q12769 1436 aa0.63□□□□□ -2.31
SUPT16H-206ENST00000556309 SMARCA2P51531 1590 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 PLB1Q6P1J6 1458 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 RP1P56715 2156 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 ADCY9O60503 1353 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 RTL9Q8NET4 1388 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 TEX50A0A1B0GTY4 177 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 TINCRA0A1B0GVN0 87 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 MEIS3P1A6NDR6 274 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 ARL5CA6NH57 179 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 MIF4GDA9UHW6 222 aaKnown RBP0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 IBA57-AS1B1ANH7 110 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM25AB3EWG3 89 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM25CB3EWG5 89 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM25GB3EWG6 89 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 H0YJX3 145 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 M0QZK8 103 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 ATP8B1O43520 1251 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 CHP2O43745 196 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 CST8O60676 142 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 SULT1C4O75897 302 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 DHFRP00374 187 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 APOA2P02652 100 aa0.62□□□□□ -2.31
SUPT16H-206ENST00000556309 IFNA6P05013 189 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms