RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 MLXQ9UH92 298 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 ZNF320A2RRD8 509 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 A8MWP6 167 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 OR11H12B2RN74 326 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 PGLYRP1O75594 196 aaPredicted RBP8.89□□□□□ -0.99
GABPB1-206ENST00000543881 PMP2P02689 132 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 HERV-K104P61576 105 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 TMEM69Q5SWH9 247 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 CROCCP3Q8IVE0 287 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 TMEM61Q8N0U2 210 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 SAMD12Q8N8I0 201 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 DMBX1Q8NFW5 382 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 ZNF502Q8TBZ5 544 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 MOB3AQ96BX8 217 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 ZNF2Q9BSG1 426 aaPredicted RBP8.89□□□□□ -0.99
GABPB1-206ENST00000543881 SRD5A3Q9H8P0 318 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 SLC2A8Q9NY64 477 aa8.89□□□□□ -0.99
GABPB1-206ENST00000543881 TRBV7-1A0A0A6YYK4 115 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 TEX50A0A1B0GTY4 177 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 RLN1P04808 185 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 GPR183P32249 361 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 WT1-ASQ06250 92 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 FAM106AQ4KMX7 169 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 ZNF585BQ52M93 769 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 TM4SF20Q53R12 229 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 LYSMD2Q8IV50 215 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 UXS1Q8NBZ7 420 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 CD300LFQ8TDQ1 290 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 FCAMRQ8WWV6 532 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 CXorf58Q96LI9 332 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 SRSF8Q9BRL6 282 aaKnown RBP8.88□□□□□ -0.99
GABPB1-206ENST00000543881 QTRT1Q9BXR0 403 aaKnown RBP8.88□□□□□ -0.99
GABPB1-206ENST00000543881 COMMD5Q9GZQ3 224 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 FXYD6Q9H0Q3 95 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 COMMD9Q9P000 198 aa8.88□□□□□ -0.99
GABPB1-206ENST00000543881 IGHV3-35A0A0C4DH35 117 aa8.87□□□□□ -0.99
GABPB1-206ENST00000543881 EIF4EP06730 217 aaKnown RBP8.87□□□□□ -0.99
GABPB1-206ENST00000543881 FGF2P09038 288 aa8.87□□□□□ -0.99
GABPB1-206ENST00000543881 F2RP25116 425 aa8.87□□□□□ -0.99
GABPB1-206ENST00000543881 MFAP2P55001 183 aa8.87□□□□□ -0.99
GABPB1-206ENST00000543881 ZNF57Q68EA5 555 aaPredicted RBP8.87□□□□□ -0.99
GABPB1-206ENST00000543881 TSPAN14Q8NG11 270 aa8.87□□□□□ -0.99
GABPB1-206ENST00000543881 NSG2Q9Y328 171 aa8.87□□□□□ -0.99
GABPB1-206ENST00000543881 A0A087WXM4 84 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 MARCH11A6NNE9 402 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 SCAF4O95104 1147 aaKnown RBP8.86□□□□□ -0.99
GABPB1-206ENST00000543881 KRASP01116 189 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 SERPINE2P07093 398 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 TRAPPC2P0DI81 140 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 TRAPPC2BP0DI82 140 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 C8orf88P0DMB2 117 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 OR13C7P0DN81 318 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 PTBP1P26599 531 aaKnown RBP eCLIP8.86□□□□□ -0.992e-8■■■■□ 24.2
GABPB1-206ENST00000543881 HLA-DMAP28067 261 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 PRSS3P35030 304 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 HRH1P35367 487 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 G6PCP35575 357 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 LPAR6P43657 344 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 THOC7Q6I9Y2 204 aaKnown RBP8.86□□□□□ -0.99
GABPB1-206ENST00000543881 BTNL8Q6UX41 500 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 GDPD1Q8N9F7 314 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 OR5H2Q8NGV7 314 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 SLC25A46Q96AG3 418 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 DGCR14Q96DF8 476 aaKnown RBP8.86□□□□□ -0.99
GABPB1-206ENST00000543881 ZNF436Q9C0F3 470 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-206ENST00000543881 NDUFA4L2Q9NRX3 87 aa8.86□□□□□ -0.99
GABPB1-206ENST00000543881 CXorf65A6NEN9 183 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 DBX1A6NMT0 343 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 PFDN1O60925 122 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 TAS2R46P59540 309 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 NCS1P62166 190 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 PLET1Q6UQ28 207 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 RPP25LQ8N5L8 163 aaKnown RBP8.85□□□□□ -0.99
GABPB1-206ENST00000543881 OR1L8Q8NGR8 309 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 VN1R17PQ8TDU5 208 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 GPX8Q8TED1 209 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 BORCS5Q969J3 196 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 THYN1Q9P016 225 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
GABPB1-206ENST00000543881 IGHV3-21A0A0B4J1V1 117 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 NUPR2A6NF83 97 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 OR2T8A6NH00 312 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 F8W735 103 aaPredicted RBP8.84□□□□□ -0.99
GABPB1-206ENST00000543881 GPR31O00270 319 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 TGOLN2O43493 480 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 S100A1P23297 94 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 ERVK-16P61578 105 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 PMS2P11Q13670 270 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 PHLDA2Q53GA4 152 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 SLC25A24Q6NUK1 477 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 CADM3Q8N126 398 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 OR52B4Q8NGK2 314 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 OR6F1Q8NGZ6 308 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 ZNF414Q96IQ9 312 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 FUNDC2Q9BWH2 189 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 HINT2Q9BX68 163 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 COMMD3Q9UBI1 195 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 OR51B2Q9Y5P1 312 aa8.84□□□□□ -0.99
GABPB1-206ENST00000543881 F11RQ9Y624 299 aaKnown RBP8.84□□□□□ -0.99
GABPB1-206ENST00000543881 SMIM31A0A1B0GVY4 71 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms