RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ZBTB34Q8NCN2 500 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 CT45A3Q8NHU0 189 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 MGST3O14880 152 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 GLRXP35754 106 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 TCF23Q7RTU1 214 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 MRPL52Q86TS9 123 aaKnown RBP12.16□□□□□ -0.46
DDX55-209ENST00000542286 LYG1Q8N1E2 194 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 ZCCHC14Q8WYQ9 949 aaKnown RBP12.16□□□□□ -0.46
DDX55-209ENST00000542286 ANAPC16Q96DE5 110 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 ABHD17AQ96GS6 310 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 HSD17B10Q99714 261 aaKnown RBP12.16□□□□□ -0.46
DDX55-209ENST00000542286 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 SERF2P84101 59 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 TNFAIP6P98066 277 aaPredicted RBP12.16□□□□□ -0.46
DDX55-209ENST00000542286 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
DDX55-209ENST00000542286 TOMM20LQ6UXN7 152 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 TMEM147Q9BVK8 224 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 NCOR2Q9Y618 2525 aa12.16□□□□□ -0.46
DDX55-209ENST00000542286 SAA2-SAA4A0A096LPE2 208 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 SAA2P0DJI9 122 aaPredicted RBP12.15□□□□□ -0.46
DDX55-209ENST00000542286 RND1Q92730 232 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 HEYLQ9NQ87 328 aaPredicted RBP12.15□□□□□ -0.46
DDX55-209ENST00000542286 SIAH2O43255 324 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 TCF21O43680 179 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 ADH4P08319 380 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
DDX55-209ENST00000542286 HTD2P86397 168 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 OR4F5Q8NH21 305 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 OR4A16Q8NH70 328 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 OR4F4Q96R69 305 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 TMEM140Q9NV12 185 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 TRAPPC1Q9Y5R8 145 aa12.15□□□□□ -0.46
DDX55-209ENST00000542286 PAGE4O60829 102 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 LHBP01229 141 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 CHRNA7P36544 502 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 TFPI2P48307 235 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 PSMB3P49720 205 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 Q8N7P7 452 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 SSMEM1Q8WWF3 244 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 A0A0G2JNJ9 132 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 A8MXE2 369 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 TMEM250H0YL14 139 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 CD40P25942 277 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 IL3RAP26951 378 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 FAM78BQ5VT40 261 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 KCNIP4Q6PIL6 250 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 PINX1Q96BK5 328 aaKnown RBP12.14□□□□□ -0.47
DDX55-209ENST00000542286 IMMP2LQ96T52 175 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 C20orf144Q9BQM9 153 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 Q9UFV3 132 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 MED13LQ71F56 2210 aa12.14□□□□□ -0.47
DDX55-209ENST00000542286 A0A0U1RQK1 487 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 ZNF320A2RRD8 509 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 PGPEP1LA6NFU8 196 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 TMPRSS2O15393 492 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 IL6RP08887 468 aaPredicted RBP12.13□□□□□ -0.47
DDX55-209ENST00000542286 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 S1PR3Q99500 378 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 TMEM106BQ9NUM4 274 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 PAM16Q9Y3D7 125 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 REG1BP48304 166 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 DLX1P56177 255 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 RPL15P61313 204 aaKnown RBP12.13□□□□□ -0.47
DDX55-209ENST00000542286 DOLPP1Q86YN1 238 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 MANBALQ9NQG1 85 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 IGKV1-16P04430 117 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 LCN2P80188 198 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 RELBQ01201 579 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 MIC13Q5XKP0 118 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 NEUROG1Q92886 237 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 GAFA1Q96PS6 74 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 DERL1Q9BUN8 251 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 JPT1Q9UK76 154 aa12.13□□□□□ -0.47
DDX55-209ENST00000542286 IGLV3-9A0A075B6K5 115 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 YPEL1O60688 119 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 FCN3O75636 299 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 NPPCP23582 126 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 CD1BP29016 333 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 ZNF709Q8N972 641 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 YPEL2Q96QA6 119 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 DNAJC4Q9NNZ3 241 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 RNF7Q9UBF6 113 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 AKAP6Q13023 2319 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 CCL3L1P16619 93 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 ATP5G3P48201 142 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 Q6ZWC4 215 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 CMTM2Q8TAZ6 248 aa12.12□□□□□ -0.47
DDX55-209ENST00000542286 SPTBN1Q01082 2364 aaKnown RBP12.12□□□□□ -0.47
DDX55-209ENST00000542286 PIGBOS1A0A0B4J2F0 54 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 DPRXA6NFQ7 191 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 HNF1AP20823 631 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 TPTE2P1Q5T6R2 138 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 TEX43Q6ZNM6 134 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 C11orf42Q8N5U0 333 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms