RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ZNF645Q8N7E2 425 aa12.55□□□□□ -0.4
CLPTM1-202ENST00000541297 BEND2Q8NDZ0 799 aa12.55□□□□□ -0.4
CLPTM1-202ENST00000541297 PINX1Q96BK5 328 aaKnown RBP12.55□□□□□ -0.4
CLPTM1-202ENST00000541297 CBLN4Q9NTU7 201 aa12.55□□□□□ -0.4
CLPTM1-202ENST00000541297 FUT9Q9Y231 359 aa12.55□□□□□ -0.4
CLPTM1-202ENST00000541297 CR1LQ2VPA4 569 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 GATAD1Q8WUU5 269 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 TAF15Q92804 592 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 CTSZQ9UBR2 303 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 PPOXP50336 477 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 LOXL3P58215 753 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 LINC00205P59089 165 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 NUTF2P61970 127 aaKnown RBP12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 PMS2P11Q13670 270 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 MORN2Q502X0 79 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 OR8G2PQ6IF36 304 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 CENPVQ7Z7K6 275 aaPredicted RBP12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 TMEM170AQ8WVE7 144 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 ATG101Q9BSB4 218 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 PARLQ9H300 379 aa12.54□□□□□ -0.4
CLPTM1-202ENST00000541297 PDLIM4P50479 330 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 ACY3Q96HD9 319 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 UBTD1Q9HAC8 227 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 KBTBD11-OT1A0A1B0GTJ5 212 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 CGB3P0DN86 165 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 CGB7P0DN87 165 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 ZNF134P52741 427 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 GNB2P62879 340 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 SLC25A22Q9H936 323 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 CLN8Q9UBY8 286 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 F2RL2O00254 374 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 MMP23AO75900 390 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 HRASP01112 189 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 PSMB3P49720 205 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 FAM3BP58499 235 aaPredicted RBP12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 RPL31P62899 125 aaKnown RBP12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 SLC38A11Q08AI6 406 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 C11orf71Q6IPW1 123 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 ACSM6Q6P461 480 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 OR4F5Q8NH21 305 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 OR4F4Q96R69 305 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 RAB1BQ9H0U4 201 aa12.53□□□□□ -0.4
CLPTM1-202ENST00000541297 TNFRSF13BO14836 293 aaPredicted RBP12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 NDUFB3O43676 98 aa12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 G0S2P27469 103 aa12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 RPL30P62888 115 aaKnown RBP12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 ZNF585BQ52M93 769 aa12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 ACTL10Q5JWF8 245 aa12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 MRPL41Q8IXM3 137 aaKnown RBP12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 VPS13CQ709C8 3753 aa12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 LRRC10Q5BKY1 277 aa12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 PRAMEF5Q5TYX0 476 aa12.52□□□□□ -0.41
CLPTM1-202ENST00000541297 DOPEY1Q5JWR5 2465 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 CCL3L1P16619 93 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 CDKN1AP38936 164 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 ZNF843Q8N446 348 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 OR5T1Q8NG75 326 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 TMEM18Q96B42 140 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 NCOR1P1Q9H4R4 102 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 LIN7CQ9NUP9 197 aaKnown RBP12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 hADV38S2A0JD32 116 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 TMEM250H0YL14 139 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 YPEL1O60688 119 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 RAMP3O60896 148 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 ARL6IP6Q8N6S5 226 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 YPEL2Q96QA6 119 aa12.51□□□□□ -0.41
CLPTM1-202ENST00000541297 PIGBOS1A0A0B4J2F0 54 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 IGFBP2P18065 325 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 GPR12P47775 334 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 GNG10P50151 68 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 SNHG12Q9BXW3 62 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 PARD6GQ9BYG4 376 aaPredicted RBP12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 CLDN1O95832 211 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 RAB4BP61018 213 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 RPL39P5Q59GN2 51 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 TMEM200BQ69YZ2 307 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 TEX38Q6PEX7 206 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 ANAPC16Q96DE5 110 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 IDI2-AS1Q9NZ38 188 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 LINC00312Q9Y6C7 94 aa12.5□□□□□ -0.41
CLPTM1-202ENST00000541297 LINC00473A8K010 186 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 GGCTO75223 188 aaKnown RBP12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 TNFRSF9Q07011 255 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 ANKRD39Q53RE8 183 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 A6NNC1 897 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 NDUFS7O75251 213 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 CHRNA7P36544 502 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 EIF4EBP1Q13541 118 aaPredicted RBP12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 TMEM14EPQ6UXP3 125 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 OR10G9Q8NGN4 311 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 OR10G7Q8NGN6 311 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 CORO2AQ92828 525 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 IFI27L2Q9H2X8 130 aa12.49□□□□□ -0.41
CLPTM1-202ENST00000541297 ZNRD1Q9P1U0 126 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms