RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 C11orf40Q8WZ69 217 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 MRPL48Q96GC5 212 aaKnown RBP4.4□□□□□ -1.71
MRE11-209ENST00000540013 ACY3Q96HD9 319 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 KCNS1Q96KK3 526 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 LITAFQ99732 161 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 GINS3Q9BRX5 216 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 TMEM243Q9BU79 118 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 MS4A8Q9BY19 250 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 DEFB126Q9BYW3 111 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 CCDC168Q8NDH2 2452 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 MED13LQ71F56 2210 aa4.4□□□□□ -1.71
MRE11-209ENST00000540013 PCNX3Q9H6A9 2034 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 MED12LQ86YW9 2145 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 IGLV7-46A0A075B6I9 117 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 TRAV8-3A0A0A6YYJ7 113 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 LOC389332A0A1B0GUA5 103 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 HBZP02008 142 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 SULT1A3P0DMM9 295 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 SULT1A4P0DMN0 295 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 CD34P28906 385 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 S100GP29377 79 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 CA7P43166 264 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 SSR2P43308 183 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 RIPPLY3P57055 190 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 PSPHP78330 225 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 RBMY1FQ15415 496 aaKnown RBP4.39□□□□□ -1.71
MRE11-209ENST00000540013 CENPWQ5EE01 88 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 SLC25A30Q5SVS4 291 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 FAM78BQ5VT40 261 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 STX19Q8N4C7 294 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 MMGT1Q8N4V1 131 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 OR5K1Q8NHB7 308 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 DCAKDQ8WVC6 231 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 RPUSD4Q96CM3 377 aaKnown RBP4.39□□□□□ -1.71
MRE11-209ENST00000540013 NEURL3Q96EH8 262 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 DIRAS2Q96HU8 199 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 SLC35G5Q96KT7 338 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 MARVELD1Q9BSK0 173 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 GNB1LQ9BYB4 327 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 SAMD10Q9BYL1 202 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 CDC42EP4Q9H3Q1 356 aaKnown RBP4.39□□□□□ -1.71
MRE11-209ENST00000540013 RBM12B-AS1Q9P1G2 102 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 ZNF225Q9UK10 706 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 PSG8Q9UQ74 426 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 KLF13Q9Y2Y9 288 aaPredicted RBP4.39□□□□□ -1.71
MRE11-209ENST00000540013 INSIG2Q9Y5U4 225 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 ENPP4Q9Y6X5 453 aa4.39□□□□□ -1.71
MRE11-209ENST00000540013 F8P00451 2351 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 IGKV1-27A0A075B6S5 117 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 IGHV3OR16-10A0A075B7F0 116 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 KLLNB2CW77 178 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 FAAHO00519 579 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 CCDC22O60826 627 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 OR2J2O76002 312 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 IGHV3-23P01764 117 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 RBP1P09455 135 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 KLK2P20151 261 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 POLR2IP36954 125 aaKnown RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 SRP9P49458 86 aaKnown RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 HSPE1P61604 102 aaKnown RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 IGLV3-21P80748 117 aaPredicted RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 ZNF45Q02386 682 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 IAH1Q2TAA2 248 aaPredicted RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 TMEM179BQ7Z7N9 219 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 RNF175Q8N4F7 328 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 MORN4Q8NDC4 146 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 ITLN2Q8WWU7 325 aaPredicted RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 C12orf43Q96C57 262 aaKnown RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 OR52B2Q96RD2 323 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 MRPL20Q9BYC9 149 aaKnown RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 OR8D2Q9GZM6 311 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 SCRT2Q9NQ03 307 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 SPANXA1Q9NS26 97 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 MRPL27Q9P0M9 148 aaKnown RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 TMEM216Q9P0N5 145 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 ZNF835Q9Y2P0 537 aa4.38□□□□□ -1.71
MRE11-209ENST00000540013 ANKHD1Q8IWZ3 2542 aaKnown RBP4.38□□□□□ -1.71
MRE11-209ENST00000540013 APCP25054 2843 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 A0A1B0GV50 99 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 WI2-2373I1.2A0A1W2PRP0 233 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 PLAC8L1A1L4L8 177 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 C5orf49A4QMS7 147 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 PRORSD1PA6NEY8 169 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 K7EPK0 472 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 DNASE2O00115 360 aaPredicted RBP4.37□□□□□ -1.71
MRE11-209ENST00000540013 COPEO14579 308 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 PDE6DO43924 150 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 SMIM24O75264 130 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 MMP23AO75900 390 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 GPR75O95800 540 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 FOLR2P14207 255 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 RPL23P62829 140 aaKnown RBP4.37□□□□□ -1.71
MRE11-209ENST00000540013 RUNX1Q01196 453 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 PAX8Q06710 450 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 PRDX4Q13162 271 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 BIKQ13323 160 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 ZFP69Q49AA0 526 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 FAM201AQ5SY85 155 aa4.37□□□□□ -1.71
MRE11-209ENST00000540013 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms