RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MRPL27Q9P0M9 148 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 UFC1Q9Y3C8 167 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 CYB5BO43169 146 aa14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 FGF2P09038 288 aa14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 PTBP1P26599 531 aaKnown RBP eCLIP14.71□□□□□ -0.051e-6■■■■■ 49.4
TNFRSF1B-204ENST00000536782 ELLP55199 621 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 AADACL3Q5VUY0 350 aa14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TMEM17Q86X19 198 aa14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 OR1L6Q8NGR2 347 aa14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 SLC25A46Q96AG3 418 aa14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 QTRT1Q9BXR0 403 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 MRPS26Q9BYN8 205 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1B-204ENST00000536782 IGHV3-35A0A0C4DH35 117 aa14.7□□□□□ -0.06
TNFRSF1B-204ENST00000536782 UBE2NLQ5JXB2 153 aa14.7□□□□□ -0.06
TNFRSF1B-204ENST00000536782 THOC7Q6I9Y2 204 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1B-204ENST00000536782 VN1R17PQ8TDU5 208 aa14.7□□□□□ -0.06
TNFRSF1B-204ENST00000536782 BORCS5Q969J3 196 aa14.7□□□□□ -0.06
TNFRSF1B-204ENST00000536782 OVOL2Q9BRP0 275 aa14.7□□□□□ -0.06
TNFRSF1B-204ENST00000536782 COMMD9Q9P000 198 aa14.7□□□□□ -0.06
TNFRSF1B-204ENST00000536782 S1PR2O95136 353 aa14.69□□□□□ -0.06
TNFRSF1B-204ENST00000536782 HERV-K104P61576 105 aa14.69□□□□□ -0.06
TNFRSF1B-204ENST00000536782 NCS1P62166 190 aa14.69□□□□□ -0.06
TNFRSF1B-204ENST00000536782 HSD17B13Q7Z5P4 300 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1B-204ENST00000536782 SLC38A6Q8IZM9 456 aa14.69□□□□□ -0.06
TNFRSF1B-204ENST00000536782 GDPD1Q8N9F7 314 aa14.69□□□□□ -0.06
TNFRSF1B-204ENST00000536782 OR10W1Q8NGF6 305 aa14.69□□□□□ -0.06
TNFRSF1B-204ENST00000536782 ZNF436Q9C0F3 470 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1B-204ENST00000536782 MEIS3P1A6NDR6 274 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 TGOLN2O43493 480 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 XRCC3O43542 346 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 TRAPPC2P0DI81 140 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 TRAPPC2BP0DI82 140 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 RPA2P15927 270 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 GNRHRP30968 328 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 ERVK-16P61578 105 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 VBP1P61758 197 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 OR2C3Q8N628 320 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 S100A16Q96FQ6 103 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 C5orf66Q9H5L9 145 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 IFT46Q9NQC8 304 aa14.68□□□□□ -0.06
TNFRSF1B-204ENST00000536782 TEX50A0A1B0GTY4 177 aa14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 GABARAPO95166 117 aa14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 SERPINE2P07093 398 aa14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 OR13C7P0DN81 318 aa14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 SLC25A24Q6NUK1 477 aa14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 OR1L8Q8NGR8 309 aa14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 TMEM190Q8WZ59 177 aa14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 SPAG8Q99932 426 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 EHFQ9NZC4 300 aa14.67□□□□□ -0.06
TNFRSF1B-204ENST00000536782 OR2T8A6NH00 312 aa14.66□□□□□ -0.06
TNFRSF1B-204ENST00000536782 MARCH11A6NNE9 402 aa14.66□□□□□ -0.06
TNFRSF1B-204ENST00000536782 WT1-ASQ06250 92 aa14.66□□□□□ -0.06
TNFRSF1B-204ENST00000536782 DHRS11Q6UWP2 260 aa14.66□□□□□ -0.06
TNFRSF1B-204ENST00000536782 SAMD12Q8N8I0 201 aa14.66□□□□□ -0.06
TNFRSF1B-204ENST00000536782 BSCL2Q96G97 398 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1B-204ENST00000536782 CMTM3Q96MX0 182 aa14.66□□□□□ -0.06
TNFRSF1B-204ENST00000536782 DAZ1Q9NQZ3 744 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1B-204ENST00000536782 PGLYRP1O75594 196 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 RLN1P04808 185 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 F2RP25116 425 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 ALDH3B2P48448 385 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 APOC4P55056 127 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 CTF1Q16619 201 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 LAMTOR1Q6IAA8 161 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 SPSB3Q6PJ21 355 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 LSM10Q969L4 123 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 MOB3AQ96BX8 217 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 ZNF2Q9BSG1 426 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 HINT2Q9BX68 163 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 NDUFA4L2Q9NRX3 87 aa14.65□□□□□ -0.06
TNFRSF1B-204ENST00000536782 FRAS1Q86XX4 4008 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 NDUFA4O00483 81 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 TSPAN4O14817 238 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 LPAR6P43657 344 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 RFX2P48378 723 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 TMEM69Q5SWH9 247 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 GPR141Q7Z602 305 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 ATP6V0BQ99437 205 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 C21orf62Q9NYP8 219 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 UBQLN2Q9UHD9 624 aa14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 F11RQ9Y624 299 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-204ENST00000536782 KRASP01116 189 aa14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 RORCP51449 518 aa14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 Q6ZWC4 215 aa14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 WFDC3Q8IUB2 231 aa14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 CMTM1Q8IZ96 169 aa14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 FCAMRQ8WWV6 532 aa14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 DGCR14Q96DF8 476 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 NAA50Q9GZZ1 169 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 TP53TG1Q9Y2A0 90 aa14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 OR51B2Q9Y5P1 312 aa14.63□□□□□ -0.07
TNFRSF1B-204ENST00000536782 IGHV3-21A0A0B4J1V1 117 aa14.62□□□□□ -0.07
TNFRSF1B-204ENST00000536782 A0A0J9YWU9 116 aa14.62□□□□□ -0.07
TNFRSF1B-204ENST00000536782 CXorf65A6NEN9 183 aa14.62□□□□□ -0.07
TNFRSF1B-204ENST00000536782 SPRY2O43597 315 aa14.62□□□□□ -0.07
TNFRSF1B-204ENST00000536782 SNAPC5O75971 98 aa14.62□□□□□ -0.07
TNFRSF1B-204ENST00000536782 APOA1P02647 267 aa14.62□□□□□ -0.07
TNFRSF1B-204ENST00000536782 PMP2P02689 132 aa14.62□□□□□ -0.07
TNFRSF1B-204ENST00000536782 BMI1P35226 326 aa14.62□□□□□ -0.07
TNFRSF1B-204ENST00000536782 G6PCP35575 357 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms