RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HEPN1Q6WQI6 88 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 SLC25A48Q6ZT89 311 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 SLC16A13Q7RTY0 426 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 TMEM61Q8N0U2 210 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 RPP25LQ8N5L8 163 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 LRRC75AQ8NAA5 344 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 OR4P4Q8NGL7 312 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 OR2T4Q8NH00 348 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 OR2AE1Q8NHA4 323 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 PFN4Q8NHR9 129 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 ANP32BQ92688 251 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 SGK3Q96BR1 496 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF414Q96IQ9 312 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 PPP1R36Q96LQ0 422 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 Q96M85 177 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 HDHD3Q9BSH5 251 aaPredicted RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 CST11Q9H112 138 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 SYT4Q9H2B2 425 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 OR51I2Q9H344 312 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF222Q9UK12 451 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 SLC7A11Q9UPY5 501 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 SLC22A13Q9Y226 551 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 AP3M1Q9Y2T2 418 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 FAM32AQ9Y421 112 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 IER3IP1Q9Y5U9 82 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 PLECQ15149 4684 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 IGKV2D-24A0A075B6R9 120 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 TRAV27A0A087WT01 109 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 LOC102724200A0A096LPH7 203 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 A0A1W2PPE3 182 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 OR11H12B2RN74 326 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 H7C1C5 153 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 J3QT63 122 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF593O00488 134 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 MOSP00540 346 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 CST1P01037 141 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 NRASP01111 189 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 IFNA21P01568 189 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 IFNA17P01571 189 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 P0DMU3 169 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 FAM231AP0DMU4 169 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 FAM231CP0DMU5 169 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 IGHV3-43DP0DP04 118 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 PIPP12273 146 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 ANXA8P13928 327 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 RCC1P18754 421 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 RAB3BP20337 219 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 GZMHP20718 246 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 CD24P25063 80 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 HAAOP46952 286 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 CX3CR1P49238 355 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 DLX6P56179 175 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 CMC4P56277 68 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 PLP1P60201 277 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 LCN6P62502 163 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 IFFO1Q0D2I5 559 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 UNC119Q13432 240 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 APOFQ13790 326 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 RBMY1FQ15415 496 aaKnown RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 GRK1Q15835 563 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 MESTQ5EB52 335 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 CTRB2Q6GPI1 263 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 RPL13AP3Q6NVV1 102 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 HAGHLQ6PII5 290 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 LINC00322Q6ZN03 302 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 MBOAT2Q6ZWT7 520 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 FAM122BQ7Z309 247 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 DCXRQ7Z4W1 244 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 CROCCP2Q86T23 111 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 MICU2Q8IYU8 434 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 OR10X1Q8NGY0 326 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 OR4S2Q8NH73 311 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 MARCH1Q8TCQ1 289 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 SRSF12Q8WXF0 261 aaKnown RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 AQP3Q92482 292 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 SLAMF6Q96DU3 332 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 SEH1LQ96EE3 360 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 PRRC1Q96M27 445 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 KCTD7Q96MP8 289 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 ERMAPQ96PL5 475 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 GPX7Q96SL4 187 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 C6orf62Q9GZU0 229 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-202ENST00000535689 RNF167Q9H6Y7 350 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 AUNIPQ9H7T9 357 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 RHOFQ9HBH0 211 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF355PQ9NSJ1 428 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 LINC00527Q9UJ94 153 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 RHBDD3Q9Y3P4 386 aa2.12□□□□□ -2.07
SNHG1-202ENST00000535689 TRAV41A0A0B4J266 112 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 IGHV3-66A0A0C4DH42 116 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 SERTM2A0A1B0GWG4 89 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 LY6LH3BQJ8 138 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 SNAI2O43623 268 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 DEDDO75618 318 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 BRI3O95415 125 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 IGKV1D-33P01593 117 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 IGKV1-33P01594 117 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 LGALS1P09382 135 aaKnown RBP2.11□□□□□ -2.07
SNHG1-202ENST00000535689 SCTP09683 121 aa2.11□□□□□ -2.07
SNHG1-202ENST00000535689 CDK2P24941 298 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms