RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 UNQ9165/PRO28630Q6UXU0 137 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 CROCCP3Q8IVE0 287 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 TSPAN14Q8NG11 270 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 ZNF502Q8TBZ5 544 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 KLK9Q9UKQ9 250 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 UFC1Q9Y3C8 167 aa13.37□□□□□ -0.27
PCF11-206ENST00000533018 PLECQ15149 4684 aaKnown RBP13.36□□□□□ -0.27
PCF11-206ENST00000533018 TMEM127O75204 238 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 JTBO76095 146 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 TRAPPC2P0DI81 140 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 TRAPPC2BP0DI82 140 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 OR13C7P0DN81 318 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 PTBP1P26599 531 aaKnown RBP eCLIP13.36□□□□□ -0.277e-6■□□□□ 8.1
PCF11-206ENST00000533018 LSM3P62310 102 aaKnown RBP13.36□□□□□ -0.27
PCF11-206ENST00000533018 UBE2NLQ5JXB2 153 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 SAMD12Q8N8I0 201 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 OR5H2Q8NGV7 314 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 SRSF8Q9BRL6 282 aaKnown RBP13.36□□□□□ -0.27
PCF11-206ENST00000533018 COMMD9Q9P000 198 aa13.36□□□□□ -0.27
PCF11-206ENST00000533018 TEX50A0A1B0GTY4 177 aa13.35□□□□□ -0.27
PCF11-206ENST00000533018 OR2T8A6NH00 312 aa13.35□□□□□ -0.27
PCF11-206ENST00000533018 MARCH11A6NNE9 402 aa13.35□□□□□ -0.27
PCF11-206ENST00000533018 PGLYRP1O75594 196 aaPredicted RBP13.35□□□□□ -0.27
PCF11-206ENST00000533018 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
PCF11-206ENST00000533018 CMTM1Q8IZ96 169 aa13.35□□□□□ -0.27
PCF11-206ENST00000533018 GDPD1Q8N9F7 314 aa13.35□□□□□ -0.27
PCF11-206ENST00000533018 OR1L6Q8NGR2 347 aa13.35□□□□□ -0.27
PCF11-206ENST00000533018 MARC2Q969Z3 335 aa13.35□□□□□ -0.27
PCF11-206ENST00000533018 MRPL27Q9P0M9 148 aaKnown RBP13.35□□□□□ -0.27
PCF11-206ENST00000533018 LOC102724200A0A096LPH7 203 aaPredicted RBP13.34□□□□□ -0.27
PCF11-206ENST00000533018 IGHV3-21A0A0B4J1V1 117 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 TGOLN2O43493 480 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 SNAPC5O75971 98 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 KRASP01116 189 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 SERPINE2P07093 398 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 F2RP25116 425 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 RPS19P39019 145 aaKnown RBP13.34□□□□□ -0.27
PCF11-206ENST00000533018 LPAR6P43657 344 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 TAS2R20P59543 309 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
PCF11-206ENST00000533018 DHRS11Q6UWP2 260 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 OR1L8Q8NGR8 309 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 VN1R17PQ8TDU5 208 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 MOB3AQ96BX8 217 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 GGTLC1Q9BX51 225 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 OR51B2Q9Y5P1 312 aa13.34□□□□□ -0.27
PCF11-206ENST00000533018 TRAV25A0A0B4J276 109 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 FGF2P09038 288 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 PRSS3P35030 304 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 G6PCP35575 357 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 TAS2R46P59540 309 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 WT1-ASQ06250 92 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 HSD17B13Q7Z5P4 300 aaPredicted RBP13.33□□□□□ -0.28
PCF11-206ENST00000533018 SLC38A6Q8IZM9 456 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 UBAC2Q8NBM4 344 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 OR6F1Q8NGZ6 308 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 FCAMRQ8WWV6 532 aa13.33□□□□□ -0.28
PCF11-206ENST00000533018 LSM10Q969L4 123 aaKnown RBP13.33□□□□□ -0.28
PCF11-206ENST00000533018 DGCR14Q96DF8 476 aaKnown RBP13.33□□□□□ -0.28
PCF11-206ENST00000533018 C8orf88P0DMB2 117 aa13.32□□□□□ -0.28
PCF11-206ENST00000533018 HLA-DMAP28067 261 aa13.32□□□□□ -0.28
PCF11-206ENST00000533018 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
PCF11-206ENST00000533018 TSPAN5P62079 268 aa13.32□□□□□ -0.28
PCF11-206ENST00000533018 OR2C3Q8N628 320 aa13.32□□□□□ -0.28
PCF11-206ENST00000533018 C20orf24Q9BUV8 137 aa13.32□□□□□ -0.28
PCF11-206ENST00000533018 ZNF436Q9C0F3 470 aaPredicted RBP13.32□□□□□ -0.28
PCF11-206ENST00000533018 VCX3AQ9NNX9 186 aa13.32□□□□□ -0.28
PCF11-206ENST00000533018 GPR31O00270 319 aa13.31□□□□□ -0.28
PCF11-206ENST00000533018 HRH1P35367 487 aa13.31□□□□□ -0.28
PCF11-206ENST00000533018 PHLDA2Q53GA4 152 aa13.31□□□□□ -0.28
PCF11-206ENST00000533018 TMEM190Q8WZ59 177 aa13.31□□□□□ -0.28
PCF11-206ENST00000533018 BSCL2Q96G97 398 aaPredicted RBP13.31□□□□□ -0.28
PCF11-206ENST00000533018 C5orf66Q9H5L9 145 aa13.31□□□□□ -0.28
PCF11-206ENST00000533018 NDUFA4L2Q9NRX3 87 aa13.31□□□□□ -0.28
PCF11-206ENST00000533018 C21orf62Q9NYP8 219 aa13.31□□□□□ -0.28
PCF11-206ENST00000533018 UBQLN2Q9UHD9 624 aa13.31□□□□□ -0.28
PCF11-206ENST00000533018 IGHV3OR16-8A0A075B7F1 116 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 SMIM31A0A1B0GVY4 71 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 S100GP29377 79 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 Q56UQ5 140 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 LAMTOR1Q6IAA8 161 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 SCARB1Q8WTV0 552 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 TMEM56Q96MV1 263 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 OVOL2Q9BRP0 275 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 FXYD6Q9H0Q3 95 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 DAZ1Q9NQZ3 744 aaKnown RBP13.3□□□□□ -0.28
PCF11-206ENST00000533018 PRNDQ9UKY0 176 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 ANAPC10Q9UM13 185 aa13.3□□□□□ -0.28
PCF11-206ENST00000533018 F11RQ9Y624 299 aaKnown RBP13.3□□□□□ -0.28
PCF11-206ENST00000533018 BIRC6Q9NR09 4857 aa13.29□□□□□ -0.28
PCF11-206ENST00000533018 ZNF207O43670 478 aaKnown RBP13.29□□□□□ -0.28
PCF11-206ENST00000533018 NAT1P18440 290 aa13.29□□□□□ -0.28
PCF11-206ENST00000533018 MFAP2P55001 183 aa13.29□□□□□ -0.28
PCF11-206ENST00000533018 LPCAT3Q6P1A2 487 aa13.29□□□□□ -0.28
PCF11-206ENST00000533018 SPSB3Q6PJ21 355 aa13.29□□□□□ -0.28
PCF11-206ENST00000533018 LYSMD2Q8IV50 215 aa13.29□□□□□ -0.28
PCF11-206ENST00000533018 YIPF6Q96EC8 236 aa13.29□□□□□ -0.28
PCF11-206ENST00000533018 SPAG8Q99932 426 aaPredicted RBP13.29□□□□□ -0.28
PCF11-206ENST00000533018 FKBP11Q9NYL4 201 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms