RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MOB3AQ96BX8 217 aa12.61□□□□□ -0.39
CPSF1-207ENST00000531727 ZNF2Q9BSG1 426 aaPredicted RBP12.61□□□□□ -0.39
CPSF1-207ENST00000531727 TEX50A0A1B0GTY4 177 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 PGLYRP1O75594 196 aaPredicted RBP12.6□□□□□ -0.39
CPSF1-207ENST00000531727 SCAF4O95104 1147 aaKnown RBP12.6□□□□□ -0.39
CPSF1-207ENST00000531727 RLN1P04808 185 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 TRAPPC2P0DI81 140 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 TRAPPC2BP0DI82 140 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 C8orf88P0DMB2 117 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 NAT1P18440 290 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 F2RP25116 425 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 RPS19P39019 145 aaKnown RBP12.6□□□□□ -0.39
CPSF1-207ENST00000531727 ELLP55199 621 aaPredicted RBP12.6□□□□□ -0.39
CPSF1-207ENST00000531727 TAS2R46P59540 309 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 TAS2R20P59543 309 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 ERVK-16P61578 105 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 ANKRD55Q3KP44 614 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 TMEM69Q5SWH9 247 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 PLET1Q6UQ28 207 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 HSD17B13Q7Z5P4 300 aaPredicted RBP12.6□□□□□ -0.39
CPSF1-207ENST00000531727 VN1R17PQ8TDU5 208 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 ZNF436Q9C0F3 470 aaPredicted RBP12.6□□□□□ -0.39
CPSF1-207ENST00000531727 MRPL27Q9P0M9 148 aaKnown RBP12.6□□□□□ -0.39
CPSF1-207ENST00000531727 UFC1Q9Y3C8 167 aa12.6□□□□□ -0.39
CPSF1-207ENST00000531727 TRAV25A0A0B4J276 109 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 IGHV3-35A0A0C4DH35 117 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 TGOLN2O43493 480 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 PMP2P02689 132 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 SERPINE2P07093 398 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 OR13C7P0DN81 318 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 WT1-ASQ06250 92 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 ZNF585BQ52M93 769 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 CADM3Q8N126 398 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 SAMD12Q8N8I0 201 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 OR1L8Q8NGR8 309 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 OR5H2Q8NGV7 314 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 YIPF6Q96EC8 236 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 NDUFA4L2Q9NRX3 87 aa12.59□□□□□ -0.39
CPSF1-207ENST00000531727 SLC25A24Q6NUK1 477 aa12.58□□□□□ -0.4
CPSF1-207ENST00000531727 RBPMS2Q6ZRY4 209 aaKnown RBP12.58□□□□□ -0.4
CPSF1-207ENST00000531727 CMTM1Q8IZ96 169 aa12.58□□□□□ -0.4
CPSF1-207ENST00000531727 FCAMRQ8WWV6 532 aa12.58□□□□□ -0.4
CPSF1-207ENST00000531727 DGCR14Q96DF8 476 aaKnown RBP12.58□□□□□ -0.4
CPSF1-207ENST00000531727 GGTLC1Q9BX51 225 aa12.58□□□□□ -0.4
CPSF1-207ENST00000531727 FXYD6Q9H0Q3 95 aa12.58□□□□□ -0.4
CPSF1-207ENST00000531727 LOC102724200A0A096LPH7 203 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-207ENST00000531727 KRASP01116 189 aa12.57□□□□□ -0.4
CPSF1-207ENST00000531727 PRSS3P35030 304 aa12.57□□□□□ -0.4
CPSF1-207ENST00000531727 LPAR6P43657 344 aa12.57□□□□□ -0.4
CPSF1-207ENST00000531727 LSM3P62310 102 aaKnown RBP12.57□□□□□ -0.4
CPSF1-207ENST00000531727 OR1L6Q8NGR2 347 aa12.57□□□□□ -0.4
CPSF1-207ENST00000531727 OR6F1Q8NGZ6 308 aa12.57□□□□□ -0.4
CPSF1-207ENST00000531727 TMEM190Q8WZ59 177 aa12.57□□□□□ -0.4
CPSF1-207ENST00000531727 LSM10Q969L4 123 aaKnown RBP12.57□□□□□ -0.4
CPSF1-207ENST00000531727 BSCL2Q96G97 398 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-207ENST00000531727 OR51B2Q9Y5P1 312 aa12.57□□□□□ -0.4
CPSF1-207ENST00000531727 F11RQ9Y624 299 aaKnown RBP12.57□□□□□ -0.4
CPSF1-207ENST00000531727 OR2T8A6NH00 312 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 GPR31O00270 319 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 SNAPC5O75971 98 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 JTBO76095 146 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 G6PCP35575 357 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 MFAP2P55001 183 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 OR2C3Q8N628 320 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 TSPAN14Q8NG11 270 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 ATP6V0BQ99437 205 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 HINT2Q9BX68 163 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 VCX3AQ9NNX9 186 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 NSG2Q9Y328 171 aa12.56□□□□□ -0.4
CPSF1-207ENST00000531727 A0A087WXM4 84 aa12.55□□□□□ -0.4
CPSF1-207ENST00000531727 HRH1P35367 487 aa12.55□□□□□ -0.4
CPSF1-207ENST00000531727 SPSB3Q6PJ21 355 aa12.55□□□□□ -0.4
CPSF1-207ENST00000531727 LYSMD2Q8IV50 215 aa12.55□□□□□ -0.4
CPSF1-207ENST00000531727 SLC25A46Q96AG3 418 aa12.55□□□□□ -0.4
CPSF1-207ENST00000531727 SPAG8Q99932 426 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-207ENST00000531727 OVOL2Q9BRP0 275 aa12.55□□□□□ -0.4
CPSF1-207ENST00000531727 DAZ1Q9NQZ3 744 aaKnown RBP12.55□□□□□ -0.4
CPSF1-207ENST00000531727 FKBP11Q9NYL4 201 aa12.55□□□□□ -0.4
CPSF1-207ENST00000531727 PRNDQ9UKY0 176 aa12.55□□□□□ -0.4
CPSF1-207ENST00000531727 HYDINQ4G0P3 5121 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 IGHV3-21A0A0B4J1V1 117 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 NDUFA4O00483 81 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 EIF4EP06730 217 aaKnown RBP12.54□□□□□ -0.4
CPSF1-207ENST00000531727 HLA-DMAP28067 261 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 SLC38A6Q8IZM9 456 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 GPX8Q8TED1 209 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 SCARB1Q8WTV0 552 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 CHRDL1Q9BU40 450 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 FAM212BQ9NTI7 297 aaPredicted RBP12.54□□□□□ -0.4
CPSF1-207ENST00000531727 C21orf62Q9NYP8 219 aa12.54□□□□□ -0.4
CPSF1-207ENST00000531727 C15orf61A6NNL5 157 aa12.53□□□□□ -0.4
CPSF1-207ENST00000531727 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
CPSF1-207ENST00000531727 K7EIM0 57 aa12.53□□□□□ -0.4
CPSF1-207ENST00000531727 TSPAN4O14817 238 aa12.53□□□□□ -0.4
CPSF1-207ENST00000531727 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
CPSF1-207ENST00000531727 LPCAT3Q6P1A2 487 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms