RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ALDH3B2P48448 385 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 HSD17B13Q7Z5P4 300 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-204ENST00000521331 TPRA1Q86W33 373 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 BEST4Q8NFU0 473 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 OR13F1Q8NGS4 319 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 BSCL2Q96G97 398 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-204ENST00000521331 UBQLN2Q9UHD9 624 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 DAPK2Q9UIK4 370 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 KMT2AQ03164 3969 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 FRAS1Q86XX4 4008 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 SULT1C2O00338 296 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 PPYP01298 95 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 FGF9P31371 208 aaPredicted RBP11.03□□□□□ -0.64
PRKDC-204ENST00000521331 ODF3L2Q3SX64 289 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 SPSB3Q6PJ21 355 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 GDPD1Q8N9F7 314 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 CD300LFQ8TDQ1 290 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 ATP6V0BQ99437 205 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 RHBDL2Q9NX52 303 aa11.03□□□□□ -0.64
PRKDC-204ENST00000521331 TRAV3A0A0B4J244 114 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 OR2T8A6NH00 312 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 ZNF701M0R085 212 aaPredicted RBP11.02□□□□□ -0.65
PRKDC-204ENST00000521331 NDUFA4O00483 81 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 SFXN4Q6P4A7 337 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 HOGA1Q86XE5 327 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 DMBX1Q8NFW5 382 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 LGALS14Q8TCE9 139 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 PPP1R14BQ96C90 147 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 GALNT14Q96FL9 552 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 SLC5A7Q9GZV3 580 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 PLEKHA2Q9HB19 425 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 TXNL4BQ9NX01 149 aaKnown RBP11.02□□□□□ -0.65
PRKDC-204ENST00000521331 COMMD9Q9P000 198 aa11.02□□□□□ -0.65
PRKDC-204ENST00000521331 K7EMT4 169 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 MRPS14O60783 128 aaKnown RBP11.01□□□□□ -0.65
PRKDC-204ENST00000521331 SERPINE2P07093 398 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 TRAPPC2P0DI81 140 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 TRAPPC2BP0DI82 140 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 OR13C7P0DN81 318 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 RPA2P15927 270 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 SCAND1P57086 179 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 SLC25A24Q6NUK1 477 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 OR10W1Q8NGF6 305 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 BORCS5Q969J3 196 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 CNBD2Q96M20 576 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 C6orf62Q9GZU0 229 aaPredicted RBP11.01□□□□□ -0.65
PRKDC-204ENST00000521331 MAP6D1Q9H9H5 199 aa11.01□□□□□ -0.65
PRKDC-204ENST00000521331 S1PR2O95136 353 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 PTHLHP12272 177 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 RPL35AP18077 110 aaKnown RBP11□□□□□ -0.65
PRKDC-204ENST00000521331 FXYD4P59646 89 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 ERVK-16P61578 105 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 AADACL3Q5VUY0 350 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 LGALS9CQ6DKI2 356 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 ZNF773Q6PK81 442 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 ZNF818PQ6ZRF7 136 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 RPP25LQ8N5L8 163 aaKnown RBP11□□□□□ -0.65
PRKDC-204ENST00000521331 GVQW1Q8N7I0 195 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 OR1L8Q8NGR8 309 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 OR51H1Q8NH63 302 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 PHLDA1Q8WV24 401 aaPredicted RBP11□□□□□ -0.65
PRKDC-204ENST00000521331 GIMAP1Q8WWP7 306 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 C20orf24Q9BUV8 137 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 KRTAP17-1Q9BYP8 105 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 C21orf62Q9NYP8 219 aa11□□□□□ -0.65
PRKDC-204ENST00000521331 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
PRKDC-204ENST00000521331 TRAV18A0A075B6X5 111 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 A0A0A6YYH2 397 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 TEX50A0A1B0GTY4 177 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 A6NJ64 397 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 C15orf62A8K5M9 175 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 CMC4P56277 68 aaPredicted RBP10.99□□□□□ -0.65
PRKDC-204ENST00000521331 GABARAPL2P60520 117 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 WT1-ASQ06250 92 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 KCTD21Q4G0X4 260 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 UBE2UQ5VVX9 321 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 LSM10Q969L4 123 aaKnown RBP10.99□□□□□ -0.65
PRKDC-204ENST00000521331 CHRDL1Q9BU40 450 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 SSR3Q9UNL2 185 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 ETV7Q9Y603 341 aa10.99□□□□□ -0.65
PRKDC-204ENST00000521331 MARCH11A6NNE9 402 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 CTSDP07339 412 aaPredicted RBP10.98□□□□□ -0.65
PRKDC-204ENST00000521331 PSMB9P28065 219 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 CBX5P45973 191 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 TMEM17Q86X19 198 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 CADM3Q8N126 398 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 OR5AP2Q8NGF4 316 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 OR5B3Q8NH48 314 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 SCARB1Q8WTV0 552 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 FCGR1BQ92637 280 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 NDUFA4L2Q9NRX3 87 aa10.98□□□□□ -0.65
PRKDC-204ENST00000521331 IGHV3-21A0A0B4J1V1 117 aa10.97□□□□□ -0.65
PRKDC-204ENST00000521331 A0A1B0GVG6 124 aa10.97□□□□□ -0.65
PRKDC-204ENST00000521331 MPTX1A8MV57 137 aa10.97□□□□□ -0.65
PRKDC-204ENST00000521331 FCGR2BP31994 310 aaPredicted RBP10.97□□□□□ -0.65
PRKDC-204ENST00000521331 SDC2P34741 201 aa10.97□□□□□ -0.65
PRKDC-204ENST00000521331 ADMP35318 185 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms