RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ANXA10Q9UJ72 324 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 IGHV3OR16-8A0A075B7F1 116 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 K7EMT4 169 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 CASQ2O14958 399 aaPredicted RBP10.48□□□□□ -0.73
VARS-228ENST00000495010 HPRT1P00492 218 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 TRAPPC2P0DI81 140 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 TRAPPC2BP0DI82 140 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 OR13C7P0DN81 318 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 NQO2P16083 231 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 TFPI2P48307 235 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 Q56UQ5 140 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 THOC7Q6I9Y2 204 aaKnown RBP10.48□□□□□ -0.73
VARS-228ENST00000495010 HSD17B13Q7Z5P4 300 aaPredicted RBP10.48□□□□□ -0.73
VARS-228ENST00000495010 GDPD1Q8N9F7 314 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 ZBTB34Q8NCN2 500 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 CMTM3Q96MX0 182 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 C21orf62Q9NYP8 219 aa10.48□□□□□ -0.73
VARS-228ENST00000495010 IGKV3-7A0A075B6H7 116 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 IGHV3-21A0A0B4J1V1 117 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 TMEM235A6NFC5 223 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 IGLL5B9A064 214 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 SULT1C2O00338 296 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 RBFOX2O43251 390 aaKnown RBP eCLIP10.47□□□□□ -0.73
VARS-228ENST00000495010 MRPS14O60783 128 aaKnown RBP10.47□□□□□ -0.73
VARS-228ENST00000495010 SCGNO76038 276 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 SERPINE2P07093 398 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 FCGR2CP31995 323 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 ADMP35318 185 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 MSMO1Q15800 293 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 ZNF124Q15973 351 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 OR10W1Q8NGF6 305 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 DUSP21Q9H596 190 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 TMEM140Q9NV12 185 aa10.47□□□□□ -0.73
VARS-228ENST00000495010 C15orf62A8K5M9 175 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 C11orf94C9JXX5 98 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 DEFB4AO15263 64 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 CA1P00915 261 aaPredicted RBP10.46□□□□□ -0.73
VARS-228ENST00000495010 MFAP2P55001 183 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 ERVK-16P61578 105 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 PAFAH1B2P68402 229 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 PRSS48Q7RTY5 328 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 CENPSQ8N2Z9 138 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 TMEM116Q8NCL8 245 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 OR13F1Q8NGS4 319 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 ATP6V0BQ99437 205 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 RNF2Q99496 336 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 CHRDL1Q9BU40 450 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 RHPN1-AS1Q9BWJ2 59 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 HINT2Q9BX68 163 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 SLC5A7Q9GZV3 580 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 SMPXQ9UHP9 88 aa10.46□□□□□ -0.73
VARS-228ENST00000495010 XRCC3O43542 346 aa10.45□□□□□ -0.74
VARS-228ENST00000495010 YIF1AO95070 293 aa10.45□□□□□ -0.74
VARS-228ENST00000495010 RELQ04864 619 aaPredicted RBP10.45□□□□□ -0.74
VARS-228ENST00000495010 TMEM187Q14656 261 aa10.45□□□□□ -0.74
VARS-228ENST00000495010 POU2AF1Q16633 256 aa10.45□□□□□ -0.74
VARS-228ENST00000495010 LINC00336Q6ZUF6 198 aa10.45□□□□□ -0.74
VARS-228ENST00000495010 OR1L8Q8NGR8 309 aa10.45□□□□□ -0.74
VARS-228ENST00000495010 SCARB1Q8WTV0 552 aa10.45□□□□□ -0.74
VARS-228ENST00000495010 IGHV7-4-1A0A0J9YVY3 117 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 TEX50A0A1B0GTY4 177 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 TRDV1A0A1B0GX56 115 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 SMIM30A4D0T7 59 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 CHEK1O14757 476 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 NUPL2O15504 423 aaKnown RBP10.44□□□□□ -0.74
VARS-228ENST00000495010 SSX5O60225 188 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 PPYP01298 95 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 FGF2P09038 288 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 FXYD4P59646 89 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 WT1-ASQ06250 92 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 AADACL3Q5VUY0 350 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 C22orf42Q6IC83 251 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 ZNF367Q7RTV3 350 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 NR2C2APQ86WQ0 139 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 GBGT1Q8N5D6 347 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 BEST4Q8NFU0 473 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 OR51H1Q8NH63 302 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 LSM10Q969L4 123 aaKnown RBP10.44□□□□□ -0.74
VARS-228ENST00000495010 PLEKHA2Q9HB19 425 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 APLNQ9ULZ1 77 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 ETV7Q9Y603 341 aa10.44□□□□□ -0.74
VARS-228ENST00000495010 F11RQ9Y624 299 aaKnown RBP10.44□□□□□ -0.74
VARS-228ENST00000495010 IGHV3-49A0A0A0MS15 119 aa10.43□□□□□ -0.74
VARS-228ENST00000495010 EIF4EP06730 217 aaKnown RBP10.43□□□□□ -0.74
VARS-228ENST00000495010 GVQW1Q8N7I0 195 aa10.43□□□□□ -0.74
VARS-228ENST00000495010 COMMD9Q9P000 198 aa10.43□□□□□ -0.74
VARS-228ENST00000495010 DNAH10Q8IVF4 4471 aa10.43□□□□□ -0.74
VARS-228ENST00000495010 TRAV14DV4A0A0A6YYC5 116 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 NOTOA8MTQ0 251 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 DNASE2O00115 360 aaPredicted RBP10.42□□□□□ -0.74
VARS-228ENST00000495010 SNAPC5O75971 98 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 PTHLHP12272 177 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 TMEM17Q86X19 198 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 TSPAN14Q8NG11 270 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 BORCS5Q969J3 196 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 TMEM56Q96MV1 263 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 NDUFB11Q9NX14 153 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 DAPK2Q9UIK4 370 aa10.42□□□□□ -0.74
VARS-228ENST00000495010 OR51B2Q9Y5P1 312 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms