RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SPCS3P61009 180 aa15.31■□□□□ 0.04
USP39-218ENST00000493829 CD300CQ08708 224 aa15.31■□□□□ 0.04
USP39-218ENST00000493829 ECSCRQ19T08 205 aa15.31■□□□□ 0.04
USP39-218ENST00000493829 SLC35E3Q7Z769 313 aa15.31■□□□□ 0.04
USP39-218ENST00000493829 PLEKHA3Q9HB20 300 aa15.31■□□□□ 0.04
USP39-218ENST00000493829 RCL1Q9Y2P8 373 aaKnown RBP15.31■□□□□ 0.04
USP39-218ENST00000493829 ZNF257Q9Y2Q1 563 aa15.31■□□□□ 0.04
USP39-218ENST00000493829 K7EPK0 472 aa15.3■□□□□ 0.04
USP39-218ENST00000493829 PRCDQ00LT1 54 aa15.3■□□□□ 0.04
USP39-218ENST00000493829 IL15RAQ13261 267 aa15.3■□□□□ 0.04
USP39-218ENST00000493829 AARDQ4LEZ3 155 aa15.3■□□□□ 0.04
USP39-218ENST00000493829 ZNF702PQ9H963 129 aa15.3■□□□□ 0.04
USP39-218ENST00000493829 NDUFA4L2Q9NRX3 87 aa15.3■□□□□ 0.04
USP39-218ENST00000493829 TEX22C9J3V5 150 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 AREGP15514 252 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 CYCSP99999 105 aaKnown RBP15.29■□□□□ 0.04
USP39-218ENST00000493829 SRSF4Q08170 494 aaKnown RBP15.29■□□□□ 0.04
USP39-218ENST00000493829 Q5BKY6 102 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 C19orf35Q6ZS72 473 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 OR2T35Q8NGX2 323 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 DTD1Q8TEA8 209 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 NOL4LQ96MY1 436 aaPredicted RBP15.29■□□□□ 0.04
USP39-218ENST00000493829 PRSS22Q9GZN4 317 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 ENY2Q9NPA8 101 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 WSB1Q9Y6I7 421 aa15.29■□□□□ 0.04
USP39-218ENST00000493829 SYNGR2O43760 224 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 CRYBA1P05813 215 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 RAP2BP61225 183 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 ID3Q02535 119 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 LFNGQ8NES3 379 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 OR52E5Q8NH55 327 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 ST6GAL2Q96JF0 529 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 FAM90A26D6RGX4 464 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 H3BP45 60 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 IGHG2P01859 326 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 EGR2P11161 476 aaPredicted RBP15.28■□□□□ 0.04
USP39-218ENST00000493829 HEYLQ9NQ87 328 aaPredicted RBP15.28■□□□□ 0.04
USP39-218ENST00000493829 OR5AC2Q9NZP5 309 aa15.28■□□□□ 0.04
USP39-218ENST00000493829 TRAV14DV4A0A0A6YYC5 116 aa15.27■□□□□ 0.03
USP39-218ENST00000493829 IGLC7A0M8Q6 106 aa15.27■□□□□ 0.03
USP39-218ENST00000493829 G3V318 75 aa15.27■□□□□ 0.03
USP39-218ENST00000493829 MPC2O95563 127 aa15.27■□□□□ 0.03
USP39-218ENST00000493829 PSMB6P28072 239 aa15.27■□□□□ 0.03
USP39-218ENST00000493829 WT1-ASQ06250 92 aa15.27■□□□□ 0.03
USP39-218ENST00000493829 KCNAB3O43448 404 aa15.26■□□□□ 0.03
USP39-218ENST00000493829 MED6O75586 246 aa15.26■□□□□ 0.03
USP39-218ENST00000493829 OR13C7P0DN81 318 aa15.26■□□□□ 0.03
USP39-218ENST00000493829 ASPHD1Q5U4P2 390 aa15.26■□□□□ 0.03
USP39-218ENST00000493829 UNQ5815/PRO19632Q6UWF5 114 aa15.26■□□□□ 0.03
USP39-218ENST00000493829 Q6ZSV7 163 aa15.26■□□□□ 0.03
USP39-218ENST00000493829 MBD2Q9UBB5 411 aa15.26■□□□□ 0.03
USP39-218ENST00000493829 PAIP2BQ9ULR5 123 aaKnown RBP15.26■□□□□ 0.03
USP39-218ENST00000493829 NIPBLQ6KC79 2804 aaeCLIP15.26■□□□□ 0.035e-6■■■■■ 32.2
USP39-218ENST00000493829 A0A1W2PN81 502 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 H0YIZ8 118 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 L7N2F9 121 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 PFDN1O60925 122 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 TMEM50AO95807 157 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 CHRNA7P36544 502 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 VDAC2P45880 294 aaPredicted RBP15.25■□□□□ 0.03
USP39-218ENST00000493829 VAMP2P63027 116 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 PDLIM3Q53GG5 364 aaPredicted RBP15.25■□□□□ 0.03
USP39-218ENST00000493829 SGMS2Q8NHU3 365 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 ASB13Q8WXK3 278 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 DEDDO75618 318 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 OR5T1Q8NG75 326 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 NEURL2Q9BR09 285 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 HIPK2Q9H2X6 1198 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 CACFD1Q9UGQ2 172 aa15.25■□□□□ 0.03
USP39-218ENST00000493829 TRAV41A0A0B4J266 112 aa15.24■□□□□ 0.03
USP39-218ENST00000493829 G3V3Q6 166 aa15.24■□□□□ 0.03
USP39-218ENST00000493829 AP4M1O00189 453 aa15.24■□□□□ 0.03
USP39-218ENST00000493829 PET100P0DJ07 73 aa15.24■□□□□ 0.03
USP39-218ENST00000493829 FXYD6-FXYD2A0A087WZ82 144 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 PRH1P02810 166 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 PVALBP20472 110 aaPredicted RBP15.23■□□□□ 0.03
USP39-218ENST00000493829 CAV2P51636 162 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 SPANXN5Q5MJ07 72 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 OR2T6Q8NHC8 308 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 THAP6Q8TBB0 222 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 DCUN1D4Q92564 292 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 ZFP57Q9NU63 452 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 PSENENQ9NZ42 101 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 NF1P21359 2839 aa15.23■□□□□ 0.03
USP39-218ENST00000493829 IFNA10P01566 189 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 RLN2P04090 185 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 IGF1P05019 195 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 PAX9P55771 341 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 ERHP84090 104 aaKnown RBP15.22■□□□□ 0.03
USP39-218ENST00000493829 TMEM267Q0VDI3 215 aaPredicted RBP15.22■□□□□ 0.03
USP39-218ENST00000493829 PRSS54Q6PEW0 395 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 MRPL41Q8IXM3 137 aaKnown RBP15.22■□□□□ 0.03
USP39-218ENST00000493829 STPG2Q8N412 459 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 OR2C3Q8N628 320 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 OR4C12Q96R67 309 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 RAB40CQ96S21 281 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 RNF126Q9BV68 326 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 SNCAP37840 140 aa15.22■□□□□ 0.03
USP39-218ENST00000493829 RPL15P61313 204 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms