RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 IGLL5B9A064 214 aa12.94□□□□□ -0.34
NUP50-218ENST00000493456 TAS2R31P59538 309 aa12.94□□□□□ -0.34
NUP50-218ENST00000493456 HSD17B13Q7Z5P4 300 aaPredicted RBP12.94□□□□□ -0.34
NUP50-218ENST00000493456 QTRT1Q9BXR0 403 aaKnown RBP12.94□□□□□ -0.34
NUP50-218ENST00000493456 TRAV1-2A0A0B4J238 106 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 OR10A3P58181 314 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 POU2AF1Q16633 256 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 CDNFQ49AH0 187 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 SPAG16Q8N0X2 631 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 ATG5Q9H1Y0 275 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 ANXA10Q9UJ72 324 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 ETV7Q9Y603 341 aa12.93□□□□□ -0.34
NUP50-218ENST00000493456 UPK2O00526 184 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 MRPS14O60783 128 aaKnown RBP12.92□□□□□ -0.34
NUP50-218ENST00000493456 HPRT1P00492 218 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 NQO2P16083 231 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 ZNF124Q15973 351 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 GPHA2Q96T91 129 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 RNF2Q99496 336 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 CHRDL1Q9BU40 450 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 C21orf62Q9NYP8 219 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 SMPXQ9UHP9 88 aa12.92□□□□□ -0.34
NUP50-218ENST00000493456 A0A1B0GVY2 172 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 TNFSF12O43508 249 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
NUP50-218ENST00000493456 CA1P00915 261 aaPredicted RBP12.91□□□□□ -0.34
NUP50-218ENST00000493456 SERPINE2P07093 398 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 MYL9P24844 172 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 TMEM187Q14656 261 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 RCN1Q15293 331 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 OGFRL1Q5TC84 451 aaPredicted RBP12.91□□□□□ -0.34
NUP50-218ENST00000493456 SLC25A24Q6NUK1 477 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 ZBTB34Q8NCN2 500 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 OR10W1Q8NGF6 305 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 NUDCD2Q8WVJ2 157 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 MGLLQ99685 303 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 CCDC90BQ9GZT6 254 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 VCXQ9H320 206 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 TPRKBQ9Y3C4 175 aa12.91□□□□□ -0.34
NUP50-218ENST00000493456 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 TRAV3A0A0B4J244 114 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 F8W735 103 aaPredicted RBP12.9□□□□□ -0.34
NUP50-218ENST00000493456 CHEK1O14757 476 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 DEFB4AO15263 64 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 XRCC3O43542 346 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 OR13C7P0DN81 318 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 RAB3BP20337 219 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 RELQ04864 619 aaPredicted RBP12.9□□□□□ -0.34
NUP50-218ENST00000493456 CATR1Q13166 79 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 NR2C2APQ86WQ0 139 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 SCARB1Q8WTV0 552 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 SECTM1Q8WVN6 248 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 CMTM3Q96MX0 182 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 RHPN1-AS1Q9BWJ2 59 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 TMEM140Q9NV12 185 aa12.9□□□□□ -0.34
NUP50-218ENST00000493456 IGHV7-4-1A0A0J9YVY3 117 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 TMEM235A6NFC5 223 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 RGS10O43665 173 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 SCGNO76038 276 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 TFPI2P48307 235 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 GNG2P59768 71 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 WT1-ASQ06250 92 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 TMEM116Q8NCL8 245 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 DMBX1Q8NFW5 382 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 DUSP21Q9H596 190 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 CCL28Q9NRJ3 127 aa12.89□□□□□ -0.35
NUP50-218ENST00000493456 F11RQ9Y624 299 aaKnown RBP12.89□□□□□ -0.35
NUP50-218ENST00000493456 C15orf61A6NNL5 157 aa12.88□□□□□ -0.35
NUP50-218ENST00000493456 SULT1C2O00338 296 aa12.88□□□□□ -0.35
NUP50-218ENST00000493456 CASQ2O14958 399 aaPredicted RBP12.88□□□□□ -0.35
NUP50-218ENST00000493456 PAFAH1B2P68402 229 aa12.88□□□□□ -0.35
NUP50-218ENST00000493456 Q56UQ5 140 aa12.88□□□□□ -0.35
NUP50-218ENST00000493456 OR1L8Q8NGR8 309 aa12.88□□□□□ -0.35
NUP50-218ENST00000493456 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
NUP50-218ENST00000493456 OR10C1Q96KK4 312 aa12.88□□□□□ -0.35
NUP50-218ENST00000493456 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
NUP50-218ENST00000493456 COMMD9Q9P000 198 aa12.88□□□□□ -0.35
NUP50-218ENST00000493456 IGHV3-21A0A0B4J1V1 117 aa12.87□□□□□ -0.35
NUP50-218ENST00000493456 K7EIM0 57 aa12.87□□□□□ -0.35
NUP50-218ENST00000493456 CD5P06127 495 aa12.87□□□□□ -0.35
NUP50-218ENST00000493456 FCGR2CP31995 323 aa12.87□□□□□ -0.35
NUP50-218ENST00000493456 ARPC4P59998 168 aa12.87□□□□□ -0.35
NUP50-218ENST00000493456 Q8NAQ8 132 aa12.87□□□□□ -0.35
NUP50-218ENST00000493456 IGKV3-7A0A075B6H7 116 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 IGHV4-4A0A075B6R2 117 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 TRAV10A0A0B4J240 114 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 TEX50A0A1B0GTY4 177 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 NUPL2O15504 423 aaKnown RBP12.86□□□□□ -0.35
NUP50-218ENST00000493456 SSX5O60225 188 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 DFFBO76075 338 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 PPYP01298 95 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 CTSGP08311 255 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 ERVK-16P61578 105 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 FAM90A2PQ658T7 463 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 ZNF773Q6PK81 442 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms