RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 SIGLEC15Q6ZMC9 328 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 LYG1Q8N1E2 194 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 DUSP18Q8NEJ0 188 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 OR11H4Q8NGC9 324 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 PHLDA1Q8WV24 401 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 TMEM80Q96HE8 168 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 URB1-AS1Q96HZ7 61 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 DERL3Q96Q80 235 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 THTPAQ9BU02 230 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 ANKRD60Q9BZ19 345 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 OR51E2Q9H255 320 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 MED20Q9H944 212 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 DAZ1Q9NQZ3 744 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 SLC35D1Q9NTN3 355 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 ZNF446Q9NWS9 450 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 CLEC5AQ9NY25 188 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 GNG8Q9UK08 70 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 RAB22AQ9UL26 194 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 FBXO7Q9Y3I1 522 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 ROS1P08922 2347 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 VWFP04275 2813 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 OR11H12B2RN74 326 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 SLC17A2O00624 439 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 HMGB3O15347 200 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 ARL6IP5O75915 188 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 KBTBD11O94819 623 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 NDUFB4O95168 129 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 RPA2P15927 270 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 CBLN1P23435 193 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 NFYBP25208 207 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 NANOS3P60323 173 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 RPL8P62917 257 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 PAFAH1B2P68402 229 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 NDPQ00604 133 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 ATXN7L3Q14CW9 347 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 RBMS2Q15434 407 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 RAB11BQ15907 218 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 SYT6Q5T7P8 510 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 OR8G2PQ6IF36 304 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 CNIH2Q6PI25 160 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 C18orf65Q6ZTR6 163 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 CENPSQ8N2Z9 138 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 TCEANCQ8N8B7 351 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 CCDC197Q8NCU1 140 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 TSPAN14Q8NG11 270 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 OR5B3Q8NH48 314 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 NTN5Q8WTR8 489 aaPredicted RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 CCDC124Q96CT7 223 aaKnown RBP1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 PGLYRP3Q96LB9 341 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 TSC22D3Q99576 134 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 GINS3Q9BRX5 216 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 OR2S2Q9NQN1 319 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 DNAJC27Q9NZQ0 273 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 ETV7Q9Y603 341 aa1.99□□□□□ -2.09
DEPDC1-203ENST00000488146 TENM1Q9UKZ4 2725 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 HELTA6NFD8 242 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 LYRM9A8MSI8 78 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 E9PI62 339 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TGOLN2O43493 480 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 FCGR3BO75015 233 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 SOX14O95416 240 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TOMM40O96008 361 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 MAS1P04201 325 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 FOLR2P14207 255 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 MGMTP16455 207 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 MYL12AP19105 171 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 SSTR5P35346 364 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 RBMXP38159 391 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 AP2S1P53680 142 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 RND3P61587 244 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 FLOT2Q14254 428 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 C1orf194Q5T5A4 169 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 C10orf99Q6UWK7 81 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 BTNL8Q6UX41 500 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ADAMTSL5Q6ZMM2 481 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ZNF771Q7L3S4 317 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 SSX6Q7RTT6 188 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TMEM179BQ7Z7N9 219 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TRPT1Q86TN4 253 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 LRRTM1Q86UE6 522 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 IQCF1Q8N6M8 205 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ZNF383Q8NA42 475 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR10H4Q8NGA5 316 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR52I1Q8NGK6 324 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR13C9Q8NGT0 318 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 RFT1Q96AA3 541 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ZNF486Q96H40 463 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 C4orf36Q96KX1 117 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 GPR82Q96P67 336 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ZNF184Q99676 751 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 PRNDQ9UKY0 176 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TP53TG3Q9ULZ0 132 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 RFNGQ9Y644 331 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TLN2Q9Y4G6 2542 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR7C1O76099 320 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 DIRAS1O95057 198 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 NUDT3O95989 172 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 PRB2P02812 416 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 LIMS3P0CW19 117 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms