RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 AP4M1O00189 453 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 SIX6O95475 246 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 IGHG2P01859 326 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 IGF1P05019 195 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 SNCAP37840 140 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 HOXA1P49639 335 aaPredicted RBP8.76□□□□□ -1.01
HDLBP-242ENST00000488013 GNB1P62873 340 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 VAMP2P63027 116 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 CD83Q01151 205 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 CXorf66Q5JRM2 361 aaPredicted RBP8.76□□□□□ -1.01
HDLBP-242ENST00000488013 SLC35E3Q7Z769 313 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 SGMS2Q8NHU3 365 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 SRSF12Q8WXF0 261 aaKnown RBP8.76□□□□□ -1.01
HDLBP-242ENST00000488013 NSG2Q9Y328 171 aa8.76□□□□□ -1.01
HDLBP-242ENST00000488013 CELSR1Q9NYQ6 3014 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 A0A1B0GVG6 124 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 FCN1O00602 326 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 CHST1O43916 411 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 MPC2O95563 127 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 SCGB1D2O95969 90 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 MBPP02686 304 aaPredicted RBP8.75□□□□□ -1.01
HDLBP-242ENST00000488013 AMY1AP04745 511 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 NUP62P37198 522 aaPredicted RBP8.75□□□□□ -1.01
HDLBP-242ENST00000488013 HTR2BP41595 481 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 S100A10P60903 97 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 RPL23AP62750 156 aaKnown RBP8.75□□□□□ -1.01
HDLBP-242ENST00000488013 UBA52P62987 128 aaKnown RBP8.75□□□□□ -1.01
HDLBP-242ENST00000488013 PJVKQ0ZLH3 352 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 IZUMO4Q1ZYL8 232 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 AKIRIN2Q53H80 203 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 Q8N2B8 174 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 DTD1Q8TEA8 209 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 ABHD5Q8WTS1 349 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 SMIM8Q96KF7 97 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 HINT2Q9BX68 163 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 HEYLQ9NQ87 328 aaPredicted RBP8.75□□□□□ -1.01
HDLBP-242ENST00000488013 TPSG1Q9NRR2 321 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 SVEP1Q4LDE5 3571 aa8.75□□□□□ -1.01
HDLBP-242ENST00000488013 MTORP42345 2549 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 MSGN1A6NI15 193 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 NPIPB5A8MRT5 1133 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 K7EPK0 472 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 CORTO00230 105 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 TSC22D2O75157 780 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 DEDDO75618 318 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 SLC25A4P12235 298 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 CRIP2P52943 208 aaPredicted RBP8.74□□□□□ -1.01
HDLBP-242ENST00000488013 POLR2GP62487 172 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDLBP-242ENST00000488013 RAB32Q13637 225 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 MRGPRG-AS1Q2M3A8 158 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 ARSJQ5FYB0 599 aaPredicted RBP8.74□□□□□ -1.01
HDLBP-242ENST00000488013 C9orf152Q5JTZ5 239 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 PRSS54Q6PEW0 395 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 OR2T6Q8NHC8 308 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 GRPEL2Q8TAA5 225 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 PPP1R14BQ96C90 147 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 SLC25A31Q9H0C2 315 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 RBKSQ9H477 322 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 TNFRSF19Q9NS68 423 aa8.74□□□□□ -1.01
HDLBP-242ENST00000488013 ANK3Q12955 4377 aaKnown RBP8.74□□□□□ -1.01
HDLBP-242ENST00000488013 FAM181BA6NEQ2 426 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 SSSCA1O60232 199 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 BRI3O95415 125 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 OR13C7P0DN81 318 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 HIST1H1BP16401 226 aaKnown RBP8.73□□□□□ -1.01
HDLBP-242ENST00000488013 VDAC2P45880 294 aaPredicted RBP8.73□□□□□ -1.01
HDLBP-242ENST00000488013 P2RY1P47900 373 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 RAB11AP62491 216 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 BLCAPP62952 87 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 SLC35B1P78383 322 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 LRRC37A5PQ49AS3 106 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 C11orf87Q6NUJ2 197 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 TMEM65Q6PI78 240 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 TTC9CQ8N5M4 171 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 OR2C3Q8N628 320 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 INO80EQ8NBZ0 244 aaPredicted RBP8.73□□□□□ -1.01
HDLBP-242ENST00000488013 ZNF114Q8NC26 417 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 OR1P1Q8NH06 330 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 ST6GAL2Q96JF0 529 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 HYLS1Q96M11 299 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 RANGRFQ9HD47 186 aaPredicted RBP8.73□□□□□ -1.01
HDLBP-242ENST00000488013 PARP11Q9NR21 331 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 THYN1Q9P016 225 aa8.73□□□□□ -1.01
HDLBP-242ENST00000488013 STRAPQ9Y3F4 350 aaKnown RBP8.73□□□□□ -1.01
HDLBP-242ENST00000488013 LSM5Q9Y4Y9 91 aaKnown RBP8.73□□□□□ -1.01
HDLBP-242ENST00000488013 TRAV41A0A0B4J266 112 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 A0A1B0GUS0 222 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 IGLC7A0M8Q6 106 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 TMEM89A2RUT3 159 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 TEX22C9J3V5 150 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 H3BUA1 57 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 NDUFA7O95182 113 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 IFNA10P01566 189 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 OPN1MWP04001 364 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 CRYGCP07315 174 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 OPN1MW2P0DN77 364 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 OPN1MW3P0DN78 364 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 DEFA4P12838 97 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 LYL1P12980 280 aa8.72□□□□□ -1.01
HDLBP-242ENST00000488013 BAXQ07812 192 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms