RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	MFAP2	P55001	183 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	ERVK-16	P61578	105 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	TSPAN5	P62079	268 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	RNASE12	Q5GAN4	147 aa	Known RBP	11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	GPR107	Q5VW38	600 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	TBC1D26	Q86UD7	250 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	GDPD1	Q8N9F7	314 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	OR1L8	Q8NGR8	309 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	CXorf58	Q96LI9	332 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	ZC4H2	Q9NQZ6	224 aa		11.34	□□□□□ -0.59
CCNL1-222	ENST00000479596	TRBV7-1	A0A0A6YYK4	115 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	FAM25A	B3EWG3	89 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	FAM25C	B3EWG5	89 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	FAM25G	B3EWG6	89 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	SERPINE2	P07093	398 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	TRAPPC2	P0DI81	140 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	TRAPPC2B	P0DI82	140 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	OR13C7	P0DN81	318 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	UCP3	P55916	312 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	THOC7	Q6I9Y2	204 aa	Known RBP	11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	UNQ9165/PRO28630	Q6UXU0	137 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	GTSCR1	Q86UQ5	136 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	OR52I2	Q8NH67	350 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	AP3S1	Q92572	193 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	ABHD1	Q96SE0	405 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	MRPS26	Q9BYN8	205 aa	Known RBP	11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	ZMAT4	Q9H898	229 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	KLK11	Q9UBX7	282 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	OR51B2	Q9Y5P1	312 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	SELENOK	Q9Y6D0	94 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	SACS	Q9NZJ4	4579 aa		11.33	□□□□□ -0.6
CCNL1-222	ENST00000479596	CD7	P09564	240 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	CBLN1	P23435	193 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	PTBP1	P26599	531 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	GPR183	P32249	361 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	HAGH	Q16775	308 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	LPCAT3	Q6P1A2	487 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	MZT2A	Q6P582	158 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	LHFPL1	Q86WI0	220 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	LAX1	Q8IWV1	398 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	SLC38A6	Q8IZM9	456 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	DYNLRB2	Q8TF09	96 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	LSM10	Q969L4	123 aa	Known RBP	11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	WDR89	Q96FK6	387 aa	Predicted RBP	11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	SEC22A	Q96IW7	307 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	MIXL1	Q9H2W2	232 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	TMEM14B	Q9NUH8	114 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	EXTL2	Q9UBQ6	330 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	MLX	Q9UH92	298 aa		11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	F11R	Q9Y624	299 aa	Known RBP	11.32	□□□□□ -0.6
CCNL1-222	ENST00000479596	C15orf61	A6NNL5	157 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596		F8W735	103 aa	Predicted RBP	11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	C3orf84	H3BNL1	204 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	CD81	P60033	236 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	SPCS2	Q15005	226 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	VN1R17P	Q8TDU5	208 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	NEURL2	Q9BR09	285 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	HINT2	Q9BX68	163 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	WFDC10A	Q9H1F0	79 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	PLEKHA3	Q9HB20	300 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	TECR	Q9NZ01	308 aa	Known RBP	11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	MTFP1	Q9UDX5	166 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	PRND	Q9UKY0	176 aa		11.31	□□□□□ -0.6
CCNL1-222	ENST00000479596	ZNF320	A2RRD8	509 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	CD3D	P04234	171 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	FAM106A	Q4KMX7	169 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	TM4SF20	Q53R12	229 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	TMEM61	Q8N0U2	210 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	UXS1	Q8NBZ7	420 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	OR4D10	Q8NGI6	311 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	OR5B3	Q8NH48	314 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	MUC7	Q8TAX7	377 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	ZNF414	Q96IQ9	312 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	EDA2R	Q9HAV5	297 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	THYN1	Q9P016	225 aa		11.3	□□□□□ -0.6
CCNL1-222	ENST00000479596	IGHV3-21	A0A0B4J1V1	117 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	IGHV3-35	A0A0C4DH35	117 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596		K7EIM0	57 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	TGOLN2	O43493	480 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	SNAPC5	O75971	98 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	TPPP	O94811	219 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	C8orf88	P0DMB2	117 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	PI3	P19957	117 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	RND3	P61587	244 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	RNASE10	Q5GAN6	216 aa	Known RBP	11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	SLC25A24	Q6NUK1	477 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	GPR141	Q7Z602	305 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	ARRDC1	Q8N5I2	433 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	DEFB125	Q8N687	156 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	MRGPRF	Q96AM1	343 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	CITED4	Q96RK1	184 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	TSC22D3	Q99576	134 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	TUBA4B	Q9H853	241 aa		11.29	□□□□□ -0.6
CCNL1-222	ENST00000479596	RBMY1B	A6NDE4	496 aa	Known RBP	11.28	□□□□□ -0.6
CCNL1-222	ENST00000479596	RBMY1E	A6NEQ0	496 aa	Known RBP	11.28	□□□□□ -0.6
CCNL1-222	ENST00000479596	OR2T8	A6NH00	312 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms