RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 IP6K3Q96PC2 410 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 CCDC90BQ9GZT6 254 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 VCXQ9H320 206 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 LINC00574Q9H8X3 128 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF586Q9NXT0 402 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 PYCARDQ9ULZ3 195 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 TRAPPC1Q9Y5R8 145 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 ICOSQ9Y6W8 199 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 RFX7Q2KHR2 1363 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 LOXHD1Q8IVV2 1947 aa2.7□□□□□ -1.98
VPS13D-207ENST00000476169 SIPA1L3O60292 1781 aaPredicted RBP2.69□□□□□ -1.98
VPS13D-207ENST00000476169 hCG_1818297A0A087WSY0 165 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 C7orf66A4D0T2 115 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 A8MT66 165 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 G3V2T6 193 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 PIRO00625 290 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 UBE2L6O14933 153 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 FSTL3O95633 263 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 SERPINE1P05121 402 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 CRYGDP07320 174 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 CD7P09564 240 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 ATP6V0CP27449 155 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 ERP29P30040 261 aaKnown RBP2.69□□□□□ -1.98
VPS13D-207ENST00000476169 DEFA3P59666 94 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 HSPE1P61604 102 aaKnown RBP2.69□□□□□ -1.98
VPS13D-207ENST00000476169 AKR1C8PQ5T2L2 129 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 Q5W150 140 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 GLT8D1Q68CQ7 371 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 GOLT1AQ6ZVE7 132 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 SLC22A24Q8N4F4 322 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 GDPD1Q8N9F7 314 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 OR4K13Q8NH42 304 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 UBALD1Q8TB05 177 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 LMX1AQ8TE12 382 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 RTN4IP1Q8WWV3 396 aaPredicted RBP2.69□□□□□ -1.98
VPS13D-207ENST00000476169 NMNAT3Q96T66 252 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 B9D2Q9BPU9 175 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 GINS3Q9BRX5 216 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 DDA1Q9BW61 102 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 OR2D2Q9H210 308 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 ABCG5Q9H222 651 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 SS18L2Q9UHA2 77 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 AK3Q9UIJ7 227 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 RPUSD1Q9UJJ7 312 aaKnown RBP2.69□□□□□ -1.98
VPS13D-207ENST00000476169 OR51B4Q9Y5P0 310 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 RFNGQ9Y644 331 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 ITGB4P16144 1822 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 DOCK8Q8NF50 2099 aa2.69□□□□□ -1.98
VPS13D-207ENST00000476169 QSER1Q2KHR3 1735 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF646O15015 1829 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-207ENST00000476169 A0A0B4J2C4 111 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 A8MWP4 228 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 TSTD3H0UI37 97 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 IGKV1D-33P01593 117 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 IGKV1-33P01594 117 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF705DP0CH99 300 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-207ENST00000476169 IFI30P13284 250 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 OPRM1P35372 400 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 NOVP48745 357 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 RAB4BP61018 213 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 FUT5Q11128 374 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 C2orf83Q53S99 150 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 TBPL2Q6SJ96 375 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 SPANXA2-OT1Q8N9U9 137 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 OR11H6Q8NGC7 330 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 GRPEL2Q8TAA5 225 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 ROPN1LQ96C74 230 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 PYURFQ96I23 114 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 GPER1Q99527 375 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 PBDC1Q9BVG4 233 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 SLC23A2Q9UGH3 650 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 SMPXQ9UHP9 88 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 NDUFAF1Q9Y375 327 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 BCORQ6W2J9 1755 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 ARHGAP21Q5T5U3 1957 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 ADAMTS9Q9P2N4 1935 aa2.68□□□□□ -1.98
VPS13D-207ENST00000476169 ANKRD31Q8N7Z5 1873 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 FUOMA2VDF0 154 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 TRAPPC13A5PLN9 417 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 OR11H12B2RN74 326 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 GPR31O00270 319 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 LST1O00453 97 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 SLC25A20O43772 301 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 SH2D1AO60880 128 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 WISP3O95389 354 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-207ENST00000476169 LHBP01229 141 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 KRTAP1-4P0C5Y4 121 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 CISD3P0C7P0 127 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 SMIM17P0DL12 118 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 CGB3P0DN86 165 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 CGB7P0DN87 165 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 CPMP14384 443 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 CBR1P16152 277 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 S100GP29377 79 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 CRABP1P29762 137 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 FGF12P61328 243 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 GNG5P63218 68 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 TNFAIP6P98066 277 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-207ENST00000476169 AMTNQ6UX39 209 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 UNQ9165/PRO28630Q6UXU0 137 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms