RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ZBTB34Q8NCN2 500 aa3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 OR4S2Q8NH73 311 aa3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 CYGBQ8WWM9 190 aa3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 FAM3DQ96BQ1 224 aa3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 RAB3CQ96E17 227 aa3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 C6orf62Q9GZU0 229 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 PLGRKTQ9HBL7 147 aa3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 RBMX2Q9Y388 322 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 PRELID3BQ9Y3B1 194 aa3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 AK6Q9Y3D8 172 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-204ENST00000474025 IGHV4-4A0A075B6R2 117 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 IGHV3OR16-8A0A075B7F1 116 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 IGKV1D-13A0A0B4J2D9 117 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 TMEM272A0A1B0GTI8 110 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 OR2T8A6NH00 312 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 C11orf94C9JXX5 98 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 J3QRK9 145 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 RAB27BO00194 218 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 DENRO43583 198 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 CA1P00915 261 aaPredicted RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 HLA-DQB1P01920 261 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 CTSDP07339 412 aaPredicted RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 GNAO1P09471 354 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 IGKV1-13P0DP09 117 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 HIST1H1DP16402 221 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 GNB3P16520 340 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 HLA-GP17693 338 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 CRHBPP24387 322 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 OR2B8PP59922 312 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 SSX1Q16384 188 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 MLANAQ16655 118 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 C2orf76Q3KRA6 126 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 TMEM91Q6ZNR0 172 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 SSX9Q7RTT3 188 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 Q8NAQ8 132 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 OR4A5Q8NH83 315 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 VN1R17PQ8TDU5 208 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 TCTEX1D2Q8WW35 142 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 BSCL2Q96G97 398 aaPredicted RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 ZNF414Q96IQ9 312 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 GPHA2Q96T91 129 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 HSD17B10Q99714 261 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 CHRDL1Q9BU40 450 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 MND1Q9BWT6 205 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 HRH4Q9H3N8 390 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 S100A14Q9HCY8 104 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 FKBP14Q9NWM8 211 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 BET1LQ9NYM9 111 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 RAB22AQ9UL26 194 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 SPATA2Q9UM82 520 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 LSM2Q9Y333 95 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 OR2W1Q9Y3N9 320 aa3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 DMBT1Q9UGM3 2413 aaPredicted RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 SRRM2Q9UQ35 2752 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-204ENST00000474025 A0A075B6Q4 140 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 C15orf62A8K5M9 175 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 K7EMT4 169 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 NDUFA4O00483 81 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 ZNF207O43670 478 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 SLC22A5O76082 557 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 HRASP01112 189 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 AMBPP02760 352 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 RBMY1A1P0DJD3 496 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 RBMY1CP0DJD4 496 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 NFYAP23511 347 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 DTYMKP23919 212 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 GADD45AP24522 165 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 HLA-DMBP28068 263 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 TMEM187Q14656 261 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 RBMY1FQ15415 496 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 SPHARQ15513 63 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 TIMM50Q3ZCQ8 353 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 LIPKQ5VXJ0 399 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 SPSB3Q6PJ21 355 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 Q6ZTC4 211 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 ZNF575Q86XF7 245 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 MFSD4AQ8N468 514 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 POM121L12Q8N7R1 296 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 GDPD1Q8N9F7 314 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 BPIFB6Q8NFQ5 453 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 OR10W1Q8NGF6 305 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 OR10R2Q8NGX6 335 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 TMEM203Q969S6 136 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 ATP6V0BQ99437 205 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 RNF2Q99496 336 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 SRSF8Q9BRL6 282 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 CENPOQ9BU64 300 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 C20orf24Q9BUV8 137 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 RNF126Q9BV68 326 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 QTRT1Q9BXR0 403 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 PLCXD1Q9NUJ7 323 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 TAS2R8Q9NYW2 309 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 THYN1Q9P016 225 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 SMPXQ9UHP9 88 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 ELF5Q9UKW6 265 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 ETV7Q9Y603 341 aa3.72□□□□□ -1.81
SNRNP40-204ENST00000474025 IGKV3-7A0A075B6H7 116 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 IGHV3-21A0A0B4J1V1 117 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 TRAV10A0A0B4J240 114 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 TRAV3A0A0B4J244 114 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms