RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SPSB3Q6PJ21 355 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 LRRTM1Q86UE6 522 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 FAM24BQ8N5W8 94 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 DMBX1Q8NFW5 382 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 STXBP6Q8NFX7 210 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 OR56B1Q8NGI3 324 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 RAB3CQ96E17 227 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 CABLES2Q9BTV7 478 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 MS4A6AQ9H2W1 248 aa4.95□□□□□ -1.62
HDAC1-204ENST00000471488 MRPS18AQ9NVS2 196 aaKnown RBP4.95□□□□□ -1.62
HDAC1-204ENST00000471488 RBMX2Q9Y388 322 aaKnown RBP4.95□□□□□ -1.62
HDAC1-204ENST00000471488 AK6Q9Y3D8 172 aaKnown RBP4.95□□□□□ -1.62
HDAC1-204ENST00000471488 TRAV3A0A0B4J244 114 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 CGB1A6NKQ9 187 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 C15orf62A8K5M9 175 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 K7EMT4 169 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 WBP4O75554 376 aaKnown RBP4.94□□□□□ -1.62
HDAC1-204ENST00000471488 DFFBO76075 338 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 ZNF688P0C7X2 276 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 GADD45AP24522 165 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 OR2B8PP59922 312 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 DLK1P80370 383 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 QRFPP83859 136 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 RELQ04864 619 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-204ENST00000471488 ST3GAL4Q11206 333 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 TIMM50Q3ZCQ8 353 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 HES5Q5TA89 166 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 UBE2UQ5VVX9 321 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 Q6ZR54 194 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 H1FOOQ8IZA3 346 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-204ENST00000471488 PUSL1Q8N0Z8 303 aaKnown RBP4.94□□□□□ -1.62
HDAC1-204ENST00000471488 VN1R17PQ8TDU5 208 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 SCARB1Q8WTV0 552 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 SECTM1Q8WVN6 248 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 CYGBQ8WWM9 190 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 ST8SIA2Q92186 375 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM203Q969S6 136 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 MISP3Q96FF7 219 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 C9orf16Q9BUW7 83 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 SMPD3Q9NY59 655 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-204ENST00000471488 BLOC1S6Q9UL45 172 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 X6R8D5 127 aa4.94□□□□□ -1.62
HDAC1-204ENST00000471488 IGKV1D-8A0A087WSZ0 117 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 IGLC7A0M8Q6 106 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 SULT1C2O00338 296 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 APOHP02749 345 aaPredicted RBP4.93□□□□□ -1.62
HDAC1-204ENST00000471488 SPART-AS1P0CW21 52 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 TRAPPC2P0DI81 140 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 TRAPPC2BP0DI82 140 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 SPP1P10451 314 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 CD37P11049 281 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 WNT4P56705 351 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 C2orf76Q3KRA6 126 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM41BQ5BJD5 291 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 MORN3Q6PF18 240 aaPredicted RBP4.93□□□□□ -1.62
HDAC1-204ENST00000471488 AHSA2Q719I0 299 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 SPAG16Q8N0X2 631 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 C6orf223Q8N319 242 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 GDPD1Q8N9F7 314 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 SLC25A46Q96AG3 418 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 PINX1Q96BK5 328 aaKnown RBP4.93□□□□□ -1.62
HDAC1-204ENST00000471488 HSD17B10Q99714 261 aaKnown RBP4.93□□□□□ -1.62
HDAC1-204ENST00000471488 QTRT1Q9BXR0 403 aaKnown RBP4.93□□□□□ -1.62
HDAC1-204ENST00000471488 RNF167Q9H6Y7 350 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 XCL2Q9UBD3 114 aa4.93□□□□□ -1.62
HDAC1-204ENST00000471488 IGKV1D-13A0A0B4J2D9 117 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM272A0A1B0GTI8 110 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 EFCAB10A6NFE3 127 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 ZNF705EA8MWA4 302 aaPredicted RBP4.92□□□□□ -1.62
HDAC1-204ENST00000471488 SLC17A2O00624 439 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 GNG7O60262 68 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 IGKV3-20P01619 116 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 CDK1P06493 297 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 SERPINE2P07093 398 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 GIG44P09565 113 aaPredicted RBP4.92□□□□□ -1.62
HDAC1-204ENST00000471488 IGKV1-13P0DP09 117 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 FXYD7P58549 80 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 RCN1Q15293 331 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM88Q6PEY1 159 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 ZNF367Q7RTV3 350 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 TRPT1Q86TN4 253 aaKnown RBP4.92□□□□□ -1.62
HDAC1-204ENST00000471488 LILRB2Q8N423 598 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 FAM89BQ8N5H3 189 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 DUSP18Q8NEJ0 188 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 TSPAN14Q8NG11 270 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 OR10R2Q8NGX6 335 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 OR51H1Q8NH63 302 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 PHYHIPQ92561 330 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 FAM3DQ96BQ1 224 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 MOB3AQ96BX8 217 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 AIFM2Q9BRQ8 373 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 GINS3Q9BRX5 216 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 TMEM140Q9NV12 185 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 ELF5Q9UKW6 265 aaPredicted RBP4.92□□□□□ -1.62
HDAC1-204ENST00000471488 NSG2Q9Y328 171 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 OR2W1Q9Y3N9 320 aa4.92□□□□□ -1.62
HDAC1-204ENST00000471488 DMBT1Q9UGM3 2413 aaPredicted RBP4.91□□□□□ -1.62
HDAC1-204ENST00000471488 TEX50A0A1B0GTY4 177 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 RPS10-NUDT3A0A1W2PQS6 291 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 FOXI3A8MTJ6 420 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms