RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 AGKQ53H12 422 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 RBM48Q5RL73 367 aaKnown RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 TTC23Q5W5X9 447 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 XAF1Q6GPH4 301 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 REEP3Q6NUK4 255 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 TMEM88Q6PEY1 159 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF621Q6ZSS3 439 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF573Q86YE8 665 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 RBM45Q8IUH3 476 aaKnown RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 LINC00346Q8IVM7 164 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 BOD1L2Q8IYS8 172 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 FAM58AQ8N1B3 248 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 PARP16Q8N5Y8 322 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 AQP11Q8NBQ7 271 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 POC1AQ8NBT0 407 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 OR10W1Q8NGF6 305 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 OR4D11Q8NGI4 311 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 OR6T1Q8NGN1 323 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 OR2T4Q8NH00 348 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 AQP3Q92482 292 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 LEAP2Q969E1 77 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 C10orf35Q96D05 121 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 CXorf58Q96LI9 332 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 PAFAH2Q99487 392 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 PHB2Q99623 299 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 URM1Q9BTM9 101 aaKnown RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 NXF2Q9GZY0 626 aaKnown RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 OR51I2Q9H344 312 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 DNAJC4Q9NNZ3 241 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 RASL12Q9NYN1 266 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 EXOGQ9Y2C4 368 aaKnown RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 STRAPQ9Y3F4 350 aaKnown RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 IGHV7-81A0A0B4J1V7 117 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 hADV38S2A0JD32 116 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 PRSS37A4D1T9 235 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 ANXA2P2A6NMY6 339 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 DCTN6O00399 190 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CXCR6O00574 342 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 UBDO15205 165 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 OGG1O15527 345 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SLC16A7O60669 478 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 KDM4BO94953 1096 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CFDP00746 253 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SEMG1P04279 462 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 NMBP08949 121 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 HTN3P15516 51 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 C4BPBP20851 252 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 ACKR3P25106 362 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 AKR1C3P42330 323 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 RPL14P50914 215 aaKnown RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 GPM6AP51674 278 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CRIP2P52943 208 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CRYBA4P53673 196 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 WNT4P56705 351 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 RRAS2P62070 204 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CDK6Q00534 326 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 DHODHQ02127 395 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CAV1Q03135 178 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 PRDX4Q13162 271 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CLINT1Q14677 625 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 TBCEQ15813 527 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 TMEM30BQ3MIR4 351 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 TRIQKQ629K1 86 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 C8orf82Q6P1X6 216 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 HEPN1Q6WQI6 88 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 Q6ZRN7 208 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 KCTD9Q7L273 389 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SSX6Q7RTT6 188 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 TMEM144Q7Z5S9 345 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CBLN2Q8IUK8 224 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 BAP18Q8IXM2 172 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 HS3ST5Q8IZT8 346 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SVBPQ8N300 66 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 GPR32P1Q8NGA4 272 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 OR56B1Q8NGI3 324 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 OR2T10Q8NGZ9 312 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 OR51A7Q8NH64 312 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 TERB2Q8NHR7 220 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 GHSRQ92847 366 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 FAM46BQ96A09 425 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 FAM162AQ96A26 154 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 PGAM5Q96HS1 289 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 Q96M85 177 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SPACA5Q96QH8 159 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 ALKBH7Q9BT30 221 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 PKIBQ9C010 78 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CHST5Q9GZS9 411 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SYT4Q9H2B2 425 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 RERGLQ9H628 205 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 TPT1P8Q9HAU6 139 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 HES4Q9HCC6 221 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SCN3BQ9NY72 215 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 CNOT2Q9NZN8 540 aaKnown RBP3.38□□□□□ -1.87
SDCBP-205ENST00000447267 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 SLC22A13Q9Y226 551 aa3.38□□□□□ -1.87
SDCBP-205ENST00000447267 FOXA2Q9Y261 457 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms