RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 RLN1P04808 185 aa13.5□□□□□ -0.25
GTF3A-204ENST00000438571 PTBP1P26599 531 aaKnown RBP eCLIP13.5□□□□□ -0.25
GTF3A-204ENST00000438571 NEDD8Q15843 81 aa13.5□□□□□ -0.25
GTF3A-204ENST00000438571 GDPD1Q8N9F7 314 aa13.5□□□□□ -0.25
GTF3A-204ENST00000438571 GIMAP1Q8WWP7 306 aa13.5□□□□□ -0.25
GTF3A-204ENST00000438571 FXYD6Q9H0Q3 95 aa13.5□□□□□ -0.25
GTF3A-204ENST00000438571 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
GTF3A-204ENST00000438571 EHFQ9NZC4 300 aa13.5□□□□□ -0.25
GTF3A-204ENST00000438571 MRPL27Q9P0M9 148 aaKnown RBP13.5□□□□□ -0.25
GTF3A-204ENST00000438571 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 A0A0J9YWU9 116 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 TEX50A0A1B0GTY4 177 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 A6NJ64 397 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 ZNF207O43670 478 aaKnown RBP13.49□□□□□ -0.25
GTF3A-204ENST00000438571 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 ODF3L2Q3SX64 289 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 RBPMS2Q6ZRY4 209 aaKnown RBP13.49□□□□□ -0.25
GTF3A-204ENST00000438571 LINC00476Q8WZB0 136 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 MARC2Q969Z3 335 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 CHRDL1Q9BU40 450 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 COMMD9Q9P000 198 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 UFC1Q9Y3C8 167 aa13.49□□□□□ -0.25
GTF3A-204ENST00000438571 TRAV25A0A0B4J276 109 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 MARCH11A6NNE9 402 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 SERPINE2P07093 398 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 RFX2P48378 723 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 ELLP55199 621 aaPredicted RBP13.48□□□□□ -0.25
GTF3A-204ENST00000438571 HERV-K104P61576 105 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 ANKRD55Q3KP44 614 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 SLC25A24Q6NUK1 477 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 OR2C3Q8N628 320 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 SRSF8Q9BRL6 282 aaKnown RBP13.48□□□□□ -0.25
GTF3A-204ENST00000438571 AIFM2Q9BRQ8 373 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 ZNF2Q9BSG1 426 aaPredicted RBP13.48□□□□□ -0.25
GTF3A-204ENST00000438571 HINT2Q9BX68 163 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 DIABLOQ9NR28 239 aa13.48□□□□□ -0.25
GTF3A-204ENST00000438571 DNAH10Q8IVF4 4471 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 DBX1A6NMT0 343 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 PGLYRP1O75594 196 aaPredicted RBP13.47□□□□□ -0.25
GTF3A-204ENST00000438571 PMP2P02689 132 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 TRAPPC2P0DI81 140 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 TRAPPC2BP0DI82 140 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 ADMP35318 185 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 G6PCP35575 357 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 VN1R17PQ8TDU5 208 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 FCAMRQ8WWV6 532 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 SPAG8Q99932 426 aaPredicted RBP13.47□□□□□ -0.25
GTF3A-204ENST00000438571 C5orf66Q9H5L9 145 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 IFT46Q9NQC8 304 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 NDUFA4L2Q9NRX3 87 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 THYN1Q9P016 225 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 ANAPC10Q9UM13 185 aa13.47□□□□□ -0.25
GTF3A-204ENST00000438571 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
GTF3A-204ENST00000438571 K7EIM0 57 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 TSPAN4O14817 238 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 LPAR6P43657 344 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 CBX5P45973 191 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 TAS2R20P59543 309 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 LYG2Q86SG7 212 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 OR1L8Q8NGR8 309 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 SCARB1Q8WTV0 552 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 MOB3AQ96BX8 217 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 C20orf24Q9BUV8 137 aa13.46□□□□□ -0.25
GTF3A-204ENST00000438571 YTHDF1Q9BYJ9 559 aaKnown RBP13.46□□□□□ -0.25
GTF3A-204ENST00000438571 AGRNO00468 2067 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 CXorf65A6NEN9 183 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 XRCC3O43542 346 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 KRASP01116 189 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 RPL35AP18077 110 aaKnown RBP13.45□□□□□ -0.26
GTF3A-204ENST00000438571 F2RP25116 425 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 ERVK-16P61578 105 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 ZNF124Q15973 351 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 WFDC3Q8IUB2 231 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 CD300LFQ8TDQ1 290 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 LSM10Q969L4 123 aaKnown RBP13.45□□□□□ -0.26
GTF3A-204ENST00000438571 DAZ1Q9NQZ3 744 aaKnown RBP13.45□□□□□ -0.26
GTF3A-204ENST00000438571 C21orf62Q9NYP8 219 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 OR51B2Q9Y5P1 312 aa13.45□□□□□ -0.26
GTF3A-204ENST00000438571 LY6G6CO95867 125 aa13.44□□□□□ -0.26
GTF3A-204ENST00000438571 FGF2P09038 288 aa13.44□□□□□ -0.26
GTF3A-204ENST00000438571 THOC7Q6I9Y2 204 aaKnown RBP13.44□□□□□ -0.26
GTF3A-204ENST00000438571 DHRS11Q6UWP2 260 aa13.44□□□□□ -0.26
GTF3A-204ENST00000438571 BSCL2Q96G97 398 aaPredicted RBP13.44□□□□□ -0.26
GTF3A-204ENST00000438571 Q9H521 79 aa13.44□□□□□ -0.26
GTF3A-204ENST00000438571 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
GTF3A-204ENST00000438571 NDUFA4O00483 81 aa13.43□□□□□ -0.26
GTF3A-204ENST00000438571 SPRY2O43597 315 aa13.43□□□□□ -0.26
GTF3A-204ENST00000438571 CTSDP07339 412 aaPredicted RBP13.43□□□□□ -0.26
GTF3A-204ENST00000438571 FCGR2BP31994 310 aaPredicted RBP13.43□□□□□ -0.26
GTF3A-204ENST00000438571 LSM3P62310 102 aaKnown RBP13.43□□□□□ -0.26
GTF3A-204ENST00000438571 PHLDA2Q53GA4 152 aa13.43□□□□□ -0.26
GTF3A-204ENST00000438571 UBE2NLQ5JXB2 153 aa13.43□□□□□ -0.26
GTF3A-204ENST00000438571 SLC38A6Q8IZM9 456 aa13.43□□□□□ -0.26
GTF3A-204ENST00000438571 OR5H2Q8NGV7 314 aa13.43□□□□□ -0.26
GTF3A-204ENST00000438571 DGCR14Q96DF8 476 aaKnown RBP13.43□□□□□ -0.26
GTF3A-204ENST00000438571 DNAH6Q9C0G6 4158 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 NAT1P18440 290 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 RPS19P39019 145 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms