RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 MARCH11A6NNE9 402 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 LGALS9O00182 355 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 APOA1P02647 267 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 IFNA6P05013 189 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 CD7P09564 240 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 ELK1P19419 428 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 S100GP29377 79 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 GPR183P32249 361 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 RORCP51449 518 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 POU2AF1Q16633 256 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 ZNF585BQ52M93 769 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 TM4SF20Q53R12 229 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 ZFAND6Q6FIF0 208 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 MZT2AQ6P582 158 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 PLET1Q6UQ28 207 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 DEFB125Q8N687 156 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 UXS1Q8NBZ7 420 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 OR1L8Q8NGR8 309 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 GPX8Q8TED1 209 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 WDR89Q96FK6 387 aaPredicted RBP7.02□□□□□ -1.29
NUP50-206ENST00000422489 CCDC140Q96MF4 163 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 CMTM3Q96MX0 182 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 SPATA25Q9BR10 227 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 TM2D3Q9BRN9 247 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 QTRT1Q9BXR0 403 aaKnown RBP7.02□□□□□ -1.29
NUP50-206ENST00000422489 FXYD6Q9H0Q3 95 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 TECRQ9NZ01 308 aaKnown RBP7.02□□□□□ -1.29
NUP50-206ENST00000422489 COMMD9Q9P000 198 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 ANAPC10Q9UM13 185 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 TENM3Q9P273 2699 aa7.02□□□□□ -1.29
NUP50-206ENST00000422489 NBEAL2Q6ZNJ1 2754 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 OR11H12B2RN74 326 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 SCAF4O95104 1147 aaKnown RBP7.01□□□□□ -1.29
NUP50-206ENST00000422489 SERPINE2P07093 398 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 PGAM2P15259 253 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 PTBP1P26599 531 aaKnown RBP eCLIP7.01□□□□□ -1.29
NUP50-206ENST00000422489 WT1-ASQ06250 92 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 CASC10Q5T4H9 136 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 GPR107Q5VW38 600 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 ZNF57Q68EA5 555 aaPredicted RBP7.01□□□□□ -1.29
NUP50-206ENST00000422489 TBC1D26Q86UD7 250 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 ZNF502Q8TBZ5 544 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 CITED4Q96RK1 184 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 SRSF8Q9BRL6 282 aaKnown RBP7.01□□□□□ -1.29
NUP50-206ENST00000422489 THAP7Q9BT49 309 aaPredicted RBP7.01□□□□□ -1.29
NUP50-206ENST00000422489 NAA50Q9GZZ1 169 aaKnown RBP7.01□□□□□ -1.29
NUP50-206ENST00000422489 SCPEP1Q9HB40 452 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 DNAH9Q9NYC9 4486 aa7.01□□□□□ -1.29
NUP50-206ENST00000422489 M0QYG6 137 aa7□□□□□ -1.29
NUP50-206ENST00000422489 ZNF182P17025 639 aaPredicted RBP7□□□□□ -1.29
NUP50-206ENST00000422489 RCVRNP35243 200 aa7□□□□□ -1.29
NUP50-206ENST00000422489 KLK9Q2XQG4 91 aa7□□□□□ -1.29
NUP50-206ENST00000422489 UNQ9165/PRO28630Q6UXU0 137 aa7□□□□□ -1.29
NUP50-206ENST00000422489 RBPMS2Q6ZRY4 209 aaKnown RBP7□□□□□ -1.29
NUP50-206ENST00000422489 H2BFWTQ7Z2G1 175 aa7□□□□□ -1.29
NUP50-206ENST00000422489 HSD17B13Q7Z5P4 300 aaPredicted RBP7□□□□□ -1.29
NUP50-206ENST00000422489 LAX1Q8IWV1 398 aa7□□□□□ -1.29
NUP50-206ENST00000422489 GDPD1Q8N9F7 314 aa7□□□□□ -1.29
NUP50-206ENST00000422489 UBAC2Q8NBM4 344 aa7□□□□□ -1.29
NUP50-206ENST00000422489 OR52B4Q8NGK2 314 aa7□□□□□ -1.29
NUP50-206ENST00000422489 OR4A16Q8NH70 328 aa7□□□□□ -1.29
NUP50-206ENST00000422489 LSM10Q969L4 123 aaKnown RBP7□□□□□ -1.29
NUP50-206ENST00000422489 TMEM56Q96MV1 263 aa7□□□□□ -1.29
NUP50-206ENST00000422489 WFDC10AQ9H1F0 79 aa7□□□□□ -1.29
NUP50-206ENST00000422489 SRD5A3Q9H8P0 318 aa7□□□□□ -1.29
NUP50-206ENST00000422489 RETNQ9HD89 108 aa7□□□□□ -1.29
NUP50-206ENST00000422489 NDUFA4L2Q9NRX3 87 aa7□□□□□ -1.29
NUP50-206ENST00000422489 FKBP11Q9NYL4 201 aa7□□□□□ -1.29
NUP50-206ENST00000422489 MLXQ9UH92 298 aa7□□□□□ -1.29
NUP50-206ENST00000422489 KLK9Q9UKQ9 250 aa7□□□□□ -1.29
NUP50-206ENST00000422489 PRNDQ9UKY0 176 aa7□□□□□ -1.29
NUP50-206ENST00000422489 UFC1Q9Y3C8 167 aa7□□□□□ -1.29
NUP50-206ENST00000422489 CEPT1Q9Y6K0 416 aa7□□□□□ -1.29
NUP50-206ENST00000422489 TMEM213A2RRL7 107 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 OR2T8A6NH00 312 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 TGOLN2O43493 480 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 Q56UQ5 140 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 THOC7Q6I9Y2 204 aaKnown RBP6.99□□□□□ -1.29
NUP50-206ENST00000422489 BTNL8Q6UX41 500 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 SLC16A13Q7RTY0 426 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 SLC38A6Q8IZM9 456 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 TMEM61Q8N0U2 210 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 VN1R17PQ8TDU5 208 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 SCARB1Q8WTV0 552 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 AP3S1Q92572 193 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 ISOC1Q96CN7 298 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 TSC22D3Q99576 134 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 FAM110AQ9BQ89 295 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 C20orf24Q9BUV8 137 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 C21orf62Q9NYP8 219 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 MRPL27Q9P0M9 148 aaKnown RBP6.99□□□□□ -1.29
NUP50-206ENST00000422489 EXTL2Q9UBQ6 330 aa6.99□□□□□ -1.29
NUP50-206ENST00000422489 F11RQ9Y624 299 aaKnown RBP6.99□□□□□ -1.29
NUP50-206ENST00000422489 IGHV3OR16-8A0A075B7F1 116 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 RBMY1BA6NDE4 496 aaKnown RBP6.98□□□□□ -1.29
NUP50-206ENST00000422489 RBMY1EA6NEQ0 496 aaKnown RBP6.98□□□□□ -1.29
NUP50-206ENST00000422489 DBX1A6NMT0 343 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 ZNF207O43670 478 aaKnown RBP6.98□□□□□ -1.29
NUP50-206ENST00000422489 CD3DP04234 171 aa6.98□□□□□ -1.29
NUP50-206ENST00000422489 RBMY1DP0C7P1 496 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms