RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 LGALSLQ3ZCW2 172 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPL39P5Q59GN2 51 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 WDR25Q64LD2 544 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 LAMTOR1Q6IAA8 161 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 DHRS7BQ6IAN0 325 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 FAM71F2Q6NXP2 309 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 CLEC2AQ6UVW9 174 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 HEPN1Q6WQI6 88 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC51BQ86UW2 128 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 FAM219AQ8IW50 185 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 KCNRGQ8N5I3 272 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF439Q8NDP4 499 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR9G1Q8NH87 305 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 LSM10Q969L4 123 aaKnown RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 GPR146Q96CH1 333 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 C5orf30Q96GV9 206 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF471Q9BX82 626 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC25A31Q9H0C2 315 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 IFI27L2Q9H2X8 130 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 PATZ1Q9HBE1 687 aaKnown RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 FAM212BQ9NTI7 297 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC35D1Q9NTN3 355 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR5AC2Q9NZP5 309 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 CACNG5Q9UF02 275 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 UBQLN2Q9UHD9 624 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPUSD1Q9UJJ7 312 aaKnown RBP3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 TNFSF18Q9UNG2 199 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 NSG2Q9Y328 171 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGF2RP11717 2491 aa3.04□□□□□ -1.92
HMGB3P20-201ENST00000417997 LOC400499M0QZD8 3231 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 BORCS7-ASMTA0A0B4J1R7 106 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A0G2JRQ6 117 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RNF222A6NCQ9 220 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 MSGN1A6NI15 193 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 C15orf62A8K5M9 175 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 CEBPZOSA8MTT3 80 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 C17orf98A8MV24 154 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 J3QR06 171 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TAAR5O14804 337 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RBFOX2O43251 390 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TXNL1O43396 289 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 PAGE4O60829 102 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RAMP3O60896 148 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 FOXH1O75593 365 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 MMP23AO75900 390 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 CRYZL1O95825 349 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 HPRT1P00492 218 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 HRASP01112 189 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 KRASP01116 189 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGKV1-5P01602 117 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RBP4P02753 201 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 CGB3P0DN86 165 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 CGB7P0DN87 165 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RRASP10301 218 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 IAPPP10997 89 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TPT1P13693 172 aaKnown RBP3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 MMP9P14780 707 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 NQO2P16083 231 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPL12P30050 165 aaKnown RBP3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 HTR2BP41595 481 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 P2RY1P47900 373 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RAB13P51153 203 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 PRRX1P54821 245 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 ATP5J2P56134 94 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR2B8PP59922 312 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 POLR2GP62487 172 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 IFITM2Q01629 132 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 EXOSC2Q13868 293 aaKnown RBP3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 NMSQ5H8A3 153 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 CT45A1Q5HYN5 189 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 FFAR4Q5NUL3 377 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 NCR3LG1Q68D85 454 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC25A24Q6NUK1 477 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TEX261Q6UWH6 196 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC25A48Q6ZT89 311 aaKnown RBP3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 Q75L30 129 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 SSX9Q7RTT3 188 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 NOTCH2NLQ7Z3S9 236 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 STX12Q86Y82 276 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TGIF2LXQ8IUE1 241 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR8H3Q8N146 312 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 ABHD12Q8N2K0 398 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF525Q8N782 197 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR4D5Q8NGN0 318 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR13D1Q8NGV5 346 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR4A16Q8NH70 328 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 CT45A3Q8NHU0 189 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 C8orf46Q8TAG6 207 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF596Q8TC21 504 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM190Q8WZ59 177 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TNFRSF14Q92956 283 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPEQ96AT9 228 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM186Q96B77 213 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 PERPQ96FX8 193 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 AQP10Q96PS8 301 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 RAB40CQ96S21 281 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 ASCL2Q99929 193 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 CLEC7AQ9BXN2 247 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 SMIM3Q9BZL3 60 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 BPESC1Q9GZL8 116 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms