RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 OR13C7P0DN81 318 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 LHFPL1Q86WI0 220 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 GPHB5Q86YW7 130 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 CLVS1Q8IUQ0 354 aaPredicted RBP13.41□□□□□ -0.26
LSM5-204ENST00000409909 LAX1Q8IWV1 398 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 OR4D10Q8NGI6 311 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 OR1L8Q8NGR8 309 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 FAM212BQ9NTI7 297 aaPredicted RBP13.41□□□□□ -0.26
LSM5-204ENST00000409909 OR51B2Q9Y5P1 312 aa13.41□□□□□ -0.26
LSM5-204ENST00000409909 TRBV7-1A0A0A6YYK4 115 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 C2orf70A6NJV1 201 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 LGALS9O00182 355 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 CLEC3BP05452 202 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 FOLR2P14207 255 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 S100GP29377 79 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 MFAP2P55001 183 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 CD300EQ496F6 205 aaPredicted RBP13.4□□□□□ -0.26
LSM5-204ENST00000409909 RNASE10Q5GAN6 216 aaKnown RBP13.4□□□□□ -0.26
LSM5-204ENST00000409909 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
LSM5-204ENST00000409909 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 Q8N402 240 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 GDPD1Q8N9F7 314 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 ZNF502Q8TBZ5 544 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 SEC22AQ96IW7 307 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 CXorf58Q96LI9 332 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 HINT2Q9BX68 163 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 TMEM14BQ9NUH8 114 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 C19orf73Q9NVV2 129 aa13.4□□□□□ -0.26
LSM5-204ENST00000409909 A8MZ25 164 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 RGS5O15539 181 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 SNAPC5O75971 98 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 IFNA6P05013 189 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 PI3P19957 117 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 PTBP1P26599 531 aaKnown RBP eCLIP13.39□□□□□ -0.273e-20■■■■■ 31.8
LSM5-204ENST00000409909 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 DYNC2LI1Q8TCX1 351 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 ZC4H2Q9NQZ6 224 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 PRNDQ9UKY0 176 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 DNAH7Q8WXX0 4024 aa13.39□□□□□ -0.27
LSM5-204ENST00000409909 ZNF785A8K8V0 405 aa13.38□□□□□ -0.27
LSM5-204ENST00000409909 CD74P04233 296 aa13.38□□□□□ -0.27
LSM5-204ENST00000409909 RND3P61587 244 aa13.38□□□□□ -0.27
LSM5-204ENST00000409909 HSD17B13Q7Z5P4 300 aaPredicted RBP13.38□□□□□ -0.27
LSM5-204ENST00000409909 ARRDC1Q8N5I2 433 aa13.38□□□□□ -0.27
LSM5-204ENST00000409909 TMEM229BQ8NBD8 167 aa13.38□□□□□ -0.27
LSM5-204ENST00000409909 OR2K2Q8NGT1 345 aa13.38□□□□□ -0.27
LSM5-204ENST00000409909 RAB2BQ8WUD1 216 aa13.38□□□□□ -0.27
LSM5-204ENST00000409909 C15orf40Q8WUR7 153 aa13.38□□□□□ -0.27
LSM5-204ENST00000409909 LSM10Q969L4 123 aaKnown RBP13.38□□□□□ -0.27
LSM5-204ENST00000409909 ZNF320A2RRD8 509 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 C15orf61A6NNL5 157 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 GABARAPH6UMI1 98 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 PGAM2P15259 253 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 TBPP20226 339 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 CBLN1P23435 193 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 GPR183P32249 361 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 TMBIM6P55061 237 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 FAM106AQ4KMX7 169 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 SGPP2Q8IWX5 399 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 OR5B3Q8NH48 314 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 VN1R17PQ8TDU5 208 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 MRGPRFQ96AM1 343 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 FKBP11Q9NYL4 201 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 THYN1Q9P016 225 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 F11RQ9Y624 299 aaKnown RBP13.37□□□□□ -0.27
LSM5-204ENST00000409909 SELENOKQ9Y6D0 94 aa13.37□□□□□ -0.27
LSM5-204ENST00000409909 TMEM213A2RRL7 107 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 PIGPP57054 158 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 UNQ9165/PRO28630Q6UXU0 137 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 H2BFWTQ7Z2G1 175 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 GTSCR1Q86UQ5 136 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 TERB2Q8NHR7 220 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 DYNLRB2Q8TF09 96 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 ZNF486Q96H40 463 aaPredicted RBP13.36□□□□□ -0.27
LSM5-204ENST00000409909 RCHY1Q96PM5 261 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 TP53RKQ96S44 253 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 TSC22D3Q99576 134 aa13.36□□□□□ -0.27
LSM5-204ENST00000409909 CCDC59Q9P031 241 aaKnown RBP13.36□□□□□ -0.27
LSM5-204ENST00000409909 IGHV3-21A0A0B4J1V1 117 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 A8MWP6 167 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 RAB3DO95716 219 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 RPL5P46777 297 aaKnown RBP13.35□□□□□ -0.27
LSM5-204ENST00000409909 PPP5CP53041 499 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 TAS2R19P59542 299 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 IZUMO4Q1ZYL8 232 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 TM4SF20Q53R12 229 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 STEAP1BQ6NZ63 245 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 BCL7BQ9BQE9 202 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 TM2D3Q9BRN9 247 aa13.35□□□□□ -0.27
LSM5-204ENST00000409909 TECRQ9NZ01 308 aaKnown RBP13.35□□□□□ -0.27
LSM5-204ENST00000409909 CYB5BO43169 146 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 IGKV1-5P01602 117 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 SCGB2B2Q4G0G5 96 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 FAAP20Q6NZ36 180 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 PLET1Q6UQ28 207 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 OR13C8Q8NGS7 320 aa13.34□□□□□ -0.27
LSM5-204ENST00000409909 OR4A16Q8NH70 328 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms