RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 MTURNQ8N3F0 131 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 CFHR5Q9BXR6 569 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 ACTL6BO94805 426 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 CLEC3BP05452 202 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 CD1BP29016 333 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 CEBPDP49716 269 aaPredicted RBP12.54□□□□□ -0.4
VLDLR-202ENST00000382099 RNPS1Q15287 305 aaKnown RBP12.54□□□□□ -0.4
VLDLR-202ENST00000382099 BMFQ96LC9 184 aa12.54□□□□□ -0.4
VLDLR-202ENST00000382099 LIPT2A6NK58 231 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
VLDLR-202ENST00000382099 HLA-DRB1P01911 266 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 SRSF8Q9BRL6 282 aaKnown RBP12.53□□□□□ -0.4
VLDLR-202ENST00000382099 TMEM265A0A087WTH1 108 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 AGFG2O95081 481 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 SLC23A3Q6PIS1 610 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 SLC25A47Q6Q0C1 308 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 SH2D6Q7Z4S9 175 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 ALKBH4Q9NXW9 302 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 ZDBF2Q9HCK1 2354 aa12.53□□□□□ -0.4
VLDLR-202ENST00000382099 CSN3P07498 182 aa12.52□□□□□ -0.4
VLDLR-202ENST00000382099 TMEM196Q5HYL7 178 aa12.52□□□□□ -0.4
VLDLR-202ENST00000382099 SAMD5Q5TGI4 173 aa12.52□□□□□ -0.4
VLDLR-202ENST00000382099 SPEM1Q8N4L4 309 aa12.52□□□□□ -0.4
VLDLR-202ENST00000382099 TRIB1Q96RU8 372 aa12.52□□□□□ -0.4
VLDLR-202ENST00000382099 LINC00470Q9BZP3 86 aa12.52□□□□□ -0.4
VLDLR-202ENST00000382099 R4GN57 208 aa12.52□□□□□ -0.4
VLDLR-202ENST00000382099 GCHFRP30047 84 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 C5orf64Q2M2E5 130 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 ETDBQ3ZM63 59 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 LYSMD4Q5XG99 296 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 TXNDC17Q9BRA2 123 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 HINT2Q9BX68 163 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 ZNF355PQ9NSJ1 428 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 RABAC1Q9UI14 185 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 HSPB8Q9UJY1 196 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 C2orf16Q68DN1 1984 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 CGAP01215 116 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 BCL3P20749 454 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 RAC3P60763 192 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 RPS21P63220 83 aaKnown RBP12.52□□□□□ -0.41
VLDLR-202ENST00000382099 C2orf91Q6ZV80 131 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 FAM168AQ92567 244 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 METTL7AQ9H8H3 244 aa12.52□□□□□ -0.41
VLDLR-202ENST00000382099 LIN7CQ9NUP9 197 aaKnown RBP12.52□□□□□ -0.41
VLDLR-202ENST00000382099 F11RQ9Y624 299 aaKnown RBP12.52□□□□□ -0.41
VLDLR-202ENST00000382099 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 FOXH1O75593 365 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 PATE4P0C8F1 98 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 ZNF138P52744 262 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 C5orf30Q96GV9 206 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 A0A1W2PRE2 83 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 IZUMO1RA6ND01 250 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 WFDC2Q14508 124 aa12.51□□□□□ -0.41
VLDLR-202ENST00000382099 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
VLDLR-202ENST00000382099 KBTBD11-OT1A0A1B0GTJ5 212 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 COX8AP10176 69 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 IGLV3-21P80748 117 aaPredicted RBP12.5□□□□□ -0.41
VLDLR-202ENST00000382099 ZNF585BQ52M93 769 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 PLEKHA3Q9HB20 300 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 TRGV10A0A0A0MS01 117 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 IGHV1-24A0A0C4DH33 117 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 C5orf49A4QMS7 147 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 ZNHIT1O43257 154 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 COL4A2P08572 1712 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 STAG3L2P0CL84 134 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 ARL4DP49703 201 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 TRIP6Q15654 476 aaKnown RBP12.5□□□□□ -0.41
VLDLR-202ENST00000382099 SPSB4Q96A44 273 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 RNF183Q96D59 192 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 C9JCJ5 164 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 GUSBP1Q15486 140 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 C1orf122Q6ZSJ8 110 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 FER1L6-AS2Q96M78 137 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 MS4A6AQ9H2W1 248 aa12.5□□□□□ -0.41
VLDLR-202ENST00000382099 A0A1B0GW15 77 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 RSPO1Q2MKA7 263 aaPredicted RBP12.49□□□□□ -0.41
VLDLR-202ENST00000382099 FAM69BQ5VUD6 431 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 C1orf53Q5VUE5 145 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 OSTCQ9NRP0 149 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 KLF7O75840 302 aaPredicted RBP12.49□□□□□ -0.41
VLDLR-202ENST00000382099 CCNOP22674 350 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 FCGR2BP31994 310 aaPredicted RBP12.49□□□□□ -0.41
VLDLR-202ENST00000382099 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 TEX45Q8NA69 505 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.49□□□□□ -0.41
VLDLR-202ENST00000382099 ARPC1AQ92747 370 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 MRPL16Q9NX20 251 aaKnown RBP12.49□□□□□ -0.41
VLDLR-202ENST00000382099 RALYQ9UKM9 306 aaKnown RBP12.49□□□□□ -0.41
VLDLR-202ENST00000382099 B5MCH6 92 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 ZNF137PP52743 207 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 PSG5Q15238 335 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 C20orf204Q6ZNR8 217 aa12.49□□□□□ -0.41
VLDLR-202ENST00000382099 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
VLDLR-202ENST00000382099 MBNL3Q9NUK0 354 aaKnown RBP12.49□□□□□ -0.41
VLDLR-202ENST00000382099 KLRF1Q9NZS2 232 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms