RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 RHBDL2Q9NX52 303 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 BLOC1S6Q9UL45 172 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 OR13C7P0DN81 318 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 RPL35AP18077 110 aaKnown RBP10.18□□□□□ -0.78
CXCL12-202ENST00000374426 WT1-ASQ06250 92 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 LAMTOR1Q6IAA8 161 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 SFXN4Q6P4A7 337 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 HOGA1Q86XE5 327 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 PHLDA1Q8WV24 401 aaPredicted RBP10.18□□□□□ -0.78
CXCL12-202ENST00000374426 BSCL2Q96G97 398 aaPredicted RBP10.18□□□□□ -0.78
CXCL12-202ENST00000374426 CNBD2Q96M20 576 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 CHRDL1Q9BU40 450 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 SLC5A7Q9GZV3 580 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 MAP6D1Q9H9H5 199 aa10.18□□□□□ -0.78
CXCL12-202ENST00000374426 IGHV3OR16-8A0A075B7F1 116 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 OR4C46A6NHA9 309 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 F8W735 103 aaPredicted RBP10.17□□□□□ -0.78
CXCL12-202ENST00000374426 NDUFA4O00483 81 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 SERPINE2P07093 398 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 FCGR2BP31994 310 aaPredicted RBP10.17□□□□□ -0.78
CXCL12-202ENST00000374426 MFAP2P55001 183 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 FXYD4P59646 89 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 CATR1Q13166 79 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 SPSB3Q6PJ21 355 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 ZNF818PQ6ZRF7 136 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 TPRA1Q86W33 373 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 TMEM217Q8N7C4 229 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 DMBX1Q8NFW5 382 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 OR51H1Q8NH63 302 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 SLC25A38Q96DW6 304 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 C20orf24Q9BUV8 137 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 PLEKHA2Q9HB19 425 aa10.17□□□□□ -0.78
CXCL12-202ENST00000374426 RRP15Q9Y3B9 282 aaKnown RBP10.17□□□□□ -0.78
CXCL12-202ENST00000374426 DNAH6Q9C0G6 4158 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 TRAV18A0A075B6X5 111 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 IGHV3-21A0A0B4J1V1 117 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 TEX50A0A1B0GTY4 177 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 CYB5BO43169 146 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 ZNF207O43670 478 aaKnown RBP10.16□□□□□ -0.78
CXCL12-202ENST00000374426 FCER2P06734 321 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 TRAPPC2P0DI81 140 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 TRAPPC2BP0DI82 140 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 ADMP35318 185 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 UBE2UQ5VVX9 321 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 LGALS9CQ6DKI2 356 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 THOC7Q6I9Y2 204 aaKnown RBP10.16□□□□□ -0.78
CXCL12-202ENST00000374426 SLC25A24Q6NUK1 477 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 IZUMO2Q6UXV1 221 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 HSD17B13Q7Z5P4 300 aaPredicted RBP10.16□□□□□ -0.78
CXCL12-202ENST00000374426 TMEM17Q86X19 198 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 OR5H6Q8NGV6 325 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 OR5B3Q8NH48 314 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 CD300LFQ8TDQ1 290 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 SCARB1Q8WTV0 552 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 GALNT14Q96FL9 552 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 ZNF414Q96IQ9 312 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 ATP6V0BQ99437 205 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 NDUFA4L2Q9NRX3 87 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 C21orf62Q9NYP8 219 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 COMMD9Q9P000 198 aa10.16□□□□□ -0.78
CXCL12-202ENST00000374426 MARCH11A6NNE9 402 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 K7EIM0 57 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 K7EMT4 169 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 CTSDP07339 412 aaPredicted RBP10.15□□□□□ -0.78
CXCL12-202ENST00000374426 PSMB9P28065 219 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 GNRHRP30968 328 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 SDC2P34741 201 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 ZNF124Q15973 351 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 AADACL3Q5VUY0 350 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 APRG1Q8IVJ8 170 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 OR1L8Q8NGR8 309 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 GIMAP1Q8WWP7 306 aa10.15□□□□□ -0.78
CXCL12-202ENST00000374426 F11RQ9Y624 299 aaKnown RBP10.15□□□□□ -0.78
CXCL12-202ENST00000374426 C15orf62A8K5M9 175 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 CLEC2LP0C7M8 214 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 HSPA13P48723 471 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 GABARAPL2P60520 117 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 UBAC2Q8NBM4 344 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 OR5AP2Q8NGF4 316 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 LSM10Q969L4 123 aaKnown RBP10.14□□□□□ -0.79
CXCL12-202ENST00000374426 RNF2Q99496 336 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 HINT2Q9BX68 163 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 AUNIPQ9H7T9 357 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 SMPXQ9UHP9 88 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 ETV7Q9Y603 341 aa10.14□□□□□ -0.79
CXCL12-202ENST00000374426 RYR1P21817 5038 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 A0A0A6YYH2 397 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 A6NJ64 397 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 MRPS14O60783 128 aaKnown RBP10.13□□□□□ -0.79
CXCL12-202ENST00000374426 CTSGP08311 255 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 SCAND1P57086 179 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 ERVK-16P61578 105 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 MXD1Q05195 221 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 SPARTQ8N0X7 666 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 CSTL1Q9H114 145 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 VCX3BQ9H321 246 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 RNF167Q9H6Y7 350 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 SSR3Q9UNL2 185 aa10.13□□□□□ -0.79
CXCL12-202ENST00000374426 NSG2Q9Y328 171 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms